Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03173 ATGGGTGTCCCGGGGAAGTGGATTAGAGCATTGGTTGGTCTAAAGAAATCAGAAAAGCGCGAGTCCTCAGAGAAGGATGGAAATGCTAGCAAGTTTCGCCATCGAAGAAAGCATTCCATCGAAATTGACAGTAGCAAACTTCAAAATGAGTTTGGCGATGATGGTGCTACACCTATTGGAGATGTAGATCAGGCAAATCCCCAATCAAACTTTGATGCTCATTATTCTCCTTCTACTTCACAACAAACACCGGATGTTGCACATAATCATCAAATCACAAGTGAAGAATGGGCTGCAATATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCTGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTTCAGGCTCGTGTTAGGGCAAGGCGTGTTCGCTTGGCATTGGAAAGTCAAACAGATCAACAGAAACTTCAGCAACAGCTTGTAAACGAAGCCCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTGGGATCTGTTGAACAAATTCAAACCAAAATATTGAAGAGACAGGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGGCAGCTTCCTACTTCTTCAGGGTTTGAACCTGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTACGTCCTTGGGAGAATCGCTTTCTTGACATTAATACGAAAGATGGAGTAAAGGTAGACGAAAATGATGTTATGGATGGCAGCAATGGAATCAGACCTCAGTTCAGGCCTACTGATGCGAAATCCAATCTGCCAAACATCCATCTGAGCGTTGTCAGTCACAAAACCGGCCCTTCTGTCTCTGATGGCTGTGAGTCTTCTTCCACTAGCAAGTCAGCAGGTTTGCTCGAGACATCGAACACACAATCTGTTAAACCAAAGTCTAACGCAAATGTTAAAATTCCCGTTGAAGAAAACAACGCAAAATCTGGTTTTCCAAGATCTCACAGTAATCCAAAGGAGAGAAACTCACAGGTAGATAAACAGACGAAAAAGCGGTTATCTCTTCCTAACAATGCAGGGGTTGGTTCAGGGGCTCAAACGACCAGATATCCTACCAGAACTAATGTGAAAGGGACACGTAGCACACAAAAGCCTATAAAGAATAAACCTAAGCTCAATGAAGAAGGGAATAGGAATCTTACTAAATCCGTTCCACAACAAACTGGTGTGTAA 1320 0.4394 MGVPGKWIRALVGLKKSEKRESSEKDGNASKFRHRRKHSIEIDSSKLQNEFGDDGATPIGDVDQANPQSNFDAHYSPSTSQQTPDVAHNHQITSEEWAAICIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQTDQQKLQQQLVNEARVREIEEGWCDSVGSVEQIQTKILKRQEAAAKRERAMAYALAHQWQAGSRQLPTSSGFEPDKSSWGWNWLERWMAVRPWENRFLDINTKDGVKVDENDVMDGSNGIRPQFRPTDAKSNLPNIHLSVVSHKTGPSVSDGCESSSTSKSAGLLETSNTQSVKPKSNANVKIPVEENNAKSGFPRSHSNPKERNSQVDKQTKKRLSLPNNAGVGSGAQTTRYPTRTNVKGTRSTQKPIKNKPKLNEEGNRNLTKSVPQQTGV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03173 439 PANTHER IQ-DOMAIN 5-RELATED 1 391 - -
Vivi6g03173 439 MobiDBLite consensus disorder prediction 15 88 - -
Vivi6g03173 439 FunFam IQ-domain 11 94 145 - -
Vivi6g03173 439 MobiDBLite consensus disorder prediction 62 88 - -
Vivi6g03173 439 MobiDBLite consensus disorder prediction 15 48 - -
Vivi6g03173 439 MobiDBLite consensus disorder prediction 290 351 - -
Vivi6g03173 439 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Vivi6g03173 439 MobiDBLite consensus disorder prediction 275 439 - -
Vivi6g03173 439 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Vivi6g03173 439 MobiDBLite consensus disorder prediction 378 415 - -
Vivi6g03173 439 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Vivi6g03173 439 Gene3D - 95 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03173 Vivi-Chr6 121247824 121253315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03173 1 423 IQD Protein Family AT3G22190 56.643 2.58e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03173 - - tpra:123923158 667.922