Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03171 ATGGTGAAATCTTCTTCACCTTCCTTTCATAAACTCAGAAACAGCAACAACAACCAACAACAATGGTCTTCTGAATATGATGAGAAAGGATATGTTCACAAATGTGAGTATTGTCACAAAGTATTCTCCACAGGCCAAGCACTCGGTGGCCACAAGACCTGTCATCGCTCCAACAAACAACAAGTAGATGATCATCATCATGTTAATAAGGTTTATAAAACTATGAAAGTCACTTTCTCTTTATCTTCTTCTCCAAGTTATCATAATAATAATGTTGATGCCAAACAGAAGAGACATTCATGGACTAGGGTTTTCAAGACTACCGTTCATCTTCCTCCTACTGCATCAACCTTCAAACCTAGCCAACAAGAATTACCAGCTGTTGACTTATTGAGTTTGCTGCCACCAAGATCGCATGCTACAAAGAAAAGGAGCAGGAGATATCTTATTCATCATGGAGTCGCTAATAATACTGGCGTTGATGAAACAGTGGCGAAGGAGGAGAAGAACCTAAAGGAAGGTGAAACAGTATTAGGTCCAAGAGGTTTTCGAACCCTTGATTTGAATGAGCTTCCGACGAATGATGTTGAAAGAGAATTAGGGCCAAGAGTTGTTCGTGACTTGGATTTGAATGAGCTCCCAACTAATCATTTACCATGA 660 0.397 MVKSSSPSFHKLRNSNNNQQQWSSEYDEKGYVHKCEYCHKVFSTGQALGGHKTCHRSNKQQVDDHHHVNKVYKTMKVTFSLSSSPSYHNNNVDAKQKRHSWTRVFKTTVHLPPTASTFKPSQQELPAVDLLSLLPPRSHATKKRSRRYLIHHGVANNTGVDETVAKEEKNLKEGETVLGPRGFRTLDLNELPTNDVERELGPRVVRDLDLNELPTNHLP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03171 219 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Vivi6g03171 219 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 22 215 IPR044653 GO:0003700
Vivi6g03171 219 Pfam C2H2-type zinc finger 32 57 - -
Vivi6g03171 219 MobiDBLite consensus disorder prediction 1 22 - -
Vivi6g03171 219 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03171 Vivi-Chr6 121227039 121227698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03171 30 55 C2H2 Transcription Factor Family AT3G19580 73.077 2.22e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03171 - - vvo:131625941 239.58