Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03164 ATGAAACCTTTGCTTCATCCATCTTCTTTTTGCTTTTTCTCTGCTGCACTTTTGATAATCTTCACTGTCAATATTCAAACATGTCTGTGCGAGGATGATGAGTACACGAACTGTAACACGGCTTTTTCGTGCGATGACAGTATCAAAGACCTCAAGTATCCGTTCTGGGGAGGAAACAGAGAGAGTTATTGTGGTGCAGTTGTTGATGATCCTAATACGAAGCTTACATGCGAAGATAACGTTTCAAAGATCACAATCAATAACCTGAAATATCGCATTCTTGAATGGGACAATACAACACAGAAACTCACTGTCGCTAGAGACGATTATTCAGGCGGTGATGTTTGTGCTGGGAATAACAATTACCAGAACAGCACATTTGATAACGCTAAATTTCAACGTTACAAGGATGATGTTGCTAACGTAACTCTCTTGTACGGTTGCAATGTTGGAGCTATAAATTTACCGACTCTGTTGTATGATATTGAGTGTAGCGAAAGTAAATATGTTTTCTACACCGTTGTTTATTCTGCTTCATTCTCTGCCTTCTGTGCTCCGACTCATGCTGTCGTGATTCCAATTTTGGGAAGCCTGGCTAAGCAACTGGAATCTGAAAATGGACTACTGAGCAGTGTATTAAAAAAATCATTACAAAGCGGTTTTGAGTTGAAATGGAGCGGAAACTATGGGGAATGTGAGAAGTGTGTTACTTCAGGTGGAGCGTGTGGGAATGGAGGCACTCAATTCAGATGTTTCTGCGATGATGGAATTCATGCAACTACATGCCTTTCATCGTTGCTCTCATCCTCAAGTATTTCTTCGTTTGATTGTGCAAATCTAAAAAACTTGACATATCCTTTCTGGAGATCAAGTAGACCGCAGTACTGCGGCCACCCGAATTTTGAGCTACAATGCAAAGAAGAGTTTGCAACCATTACCATTATGTCACAAAATTATAGAATTCTTGAAGCCGTTGATTCTGTTCATAGACTCAAAATTGTAAGAACTGATTATTGGAACAACGTTTGTCCAACCATTCCTAAGAACACAACTTTAGGCCAAACTTTCTTCGATTACAGTTCGGATCCCCACAACGTGACACTCTACTACGATTGTTCTTACACTCCATTTCCTCTATTAGATAGTCTTTCTCCCCAATTTAATTGTAGTATAAATGGAACTCAAATGGTTAACTATTTTTTGTTGGAGAGTAATCTTGTGAATGATGAGGGTTCCGTTTCTGAATCAATTGGAACATGCAAATCTAGAGTGATTGTTCCAATATTGGAGTCAGAAGCTGAAAGGATGGTGACGGATTCAAGTATGGAGAATTTAAAGAGAGCTATTGATAATGGTTTTGAAGTGGAATGGAATGCAAACAATAGTTTGTGTCATGAATGTCAAAGCTCTAGTGGACACTGTGGCTATGATCCAAACTCAAAGGATTTCACATGCTTTTGTAAGGATGGATCCTTTCCACATTCATGTAGTAGATCAGGTGAGTACCTTATGTTGTCCTTGTCCCTCTCCTCTCCTATCACCACCACCATCGTCATCATCTTCTTCTTCATCTTCTGTCTCCACCATACAACGTCGTTACCCTCTCATGCATCACCCTCTAGCTGCAACAATTCAACCTTCAACTGTGGCACCATAACCAACCTTTCCTACCCTTTCACCGGAGGCGATCGTCCTTCCTTCTGTGGGCCACCACAGTTTCACTTGAACTGCAAAAACAATATTCCAGAGTTGAACATTTCTTCATTGAGTTACCGAGTACTTCAAATCAACTCAGTAACTCATTCTCTCATCTTAGCTAGATTAGACCTTTGGAATGAAACATGCACCCAAAATTATATTAACTCGACTTTTGATGGAACTAGCTTTAGCTACGGTTCGGGAAACCGTAACCTTACTTTGTTTTATGGGTGCAAACCCACTTCAGAATTTACCAAAACGCCGCAGAATTTGTTTTACTGTGAAAATAATGGGTATAAGAACAATTCATATTCTTTGATTGGTCCATTTCCTTCAGACCCGGTTCTTAAATTTGTGGATTGTGATGAAAGTGTTGGCGTGCCAATTCTTGTAGAGCAGGCTAATAGGTTTATAGGAAATCGCTCTTTGCTTAGGGAGGTTTTGATGAAAGGGTTTAATGTGAGTTATAGCAATCCTTTTGACGATGATTGTTTCGAATGTATTGATTCTGGTGGCCAACATTGTGGATTTGATTCTGATGATAATGAATCCATTTGTATTTGTGGTAATGAGTTGTGTCCTGCAGGTCAAAGCATTAGTAAAGGCCCTGTAATAGGCGGCGTAGTTGCAGGAGTTGCAGCCCTTGTTTGCATTCTTGGCTTTGTATGCTTAGTGGTGCGGAGAAGAAGGAAAAATTATGAAAAATCTAGAAGCAGGGACCTCTTCGTGCCTCCTTCAAGCAGTGGCACTGGCACCGGCACCCTAACCTCCACTACTAATTCGTCTCAGAGTATTCCTTCTTACCCCTCTTCCAAATTGGGCGCAATGCCCAAGAGTTCCTACTTTGGTGTTCAGGTATTTACCTATGAGGAGCTTGAAGAAGCTACCAACAATTTCGACGCTTCTAAAGAACTTGGAGATGGAGGTTTTGGCACAGTTTACAAAGGTGATCTCAAAGATGGACGTGTCGTTGCAGTGAAACGCCATTACGAAAGCAATTTTAAACGTGTGACGCAGTTCATGAATGAAGTTGAGATTCTAGCGAAGTTAAGGCATAAGAACCTGGTTACACTCTATGGATGCTCCTCTAAACACAGCAGAGAGCTTCTCCTTGTTTATGAATACATACCAAATGGAACAGTAGCTGATCATATTCACGGAAAGCAATCAAGTTCGTATTTGCTTCCTTGGTCTGTAAGATTCAACATTGCACTAGAAACAGCCGAAGCACTAGCCTATCTCCATGCATCAGATGTCGTACACCGCGACGTTAAATCCAACAACATTCTCCTAGACGAAAAATTTCATGTTAAGGTTGCTGATTTCGGTCTGTCAAGGTGGCTTCCTAACGATGTCACGCATGTATCAACAGCTCCACAAGGAACACCTGGTTATGTTGACCCTGAGTATTATCAGTGTTACCAACTCAATGACAAGAGCGATGTTTATAGCTTTGGTGTAGTCTTAGCCGAGCTTATATCGTCGTTACAAGCTGTGGATATTACCAGGCACCGCAGTGACGTGAACTTGGCGAATATGGCTGTCAACAAGATTCAGGGCCAAGAATTACATGAGTTGGTTGATCCATTTCTTGGATATGAAAAAGACAGTGCTGTGAGGAGGATGACAACAGCAGTCGGTGAATTGGCATTTAGATGTTTGCAGCAGCAAAGAGACATGAGACCTTCAATGGACGAGGTTGTGGAGGTATTAAGAGCAATCAAGAGTGATGAACTTGAAACACAGGAATCAAAAGTATTGGATGTTGTTGTTAGAACAGATGAACTTGTACTTCTGAATAAGGGTCCTTATCCGGCTTCACCAAATTCTGTTGCTGACAAATGGGTTAGCGGTTCTTCTACATCTACTTCTTCATAG 3576 0.4105 MKPLLHPSSFCFFSAALLIIFTVNIQTCLCEDDEYTNCNTAFSCDDSIKDLKYPFWGGNRESYCGAVVDDPNTKLTCEDNVSKITINNLKYRILEWDNTTQKLTVARDDYSGGDVCAGNNNYQNSTFDNAKFQRYKDDVANVTLLYGCNVGAINLPTLLYDIECSESKYVFYTVVYSASFSAFCAPTHAVVIPILGSLAKQLESENGLLSSVLKKSLQSGFELKWSGNYGECEKCVTSGGACGNGGTQFRCFCDDGIHATTCLSSLLSSSSISSFDCANLKNLTYPFWRSSRPQYCGHPNFELQCKEEFATITIMSQNYRILEAVDSVHRLKIVRTDYWNNVCPTIPKNTTLGQTFFDYSSDPHNVTLYYDCSYTPFPLLDSLSPQFNCSINGTQMVNYFLLESNLVNDEGSVSESIGTCKSRVIVPILESEAERMVTDSSMENLKRAIDNGFEVEWNANNSLCHECQSSSGHCGYDPNSKDFTCFCKDGSFPHSCSRSGEYLMLSLSLSSPITTTIVIIFFFIFCLHHTTSLPSHASPSSCNNSTFNCGTITNLSYPFTGGDRPSFCGPPQFHLNCKNNIPELNISSLSYRVLQINSVTHSLILARLDLWNETCTQNYINSTFDGTSFSYGSGNRNLTLFYGCKPTSEFTKTPQNLFYCENNGYKNNSYSLIGPFPSDPVLKFVDCDESVGVPILVEQANRFIGNRSLLREVLMKGFNVSYSNPFDDDCFECIDSGGQHCGFDSDDNESICICGNELCPAGQSISKGPVIGGVVAGVAALVCILGFVCLVVRRRRKNYEKSRSRDLFVPPSSSGTGTGTLTSTTNSSQSIPSYPSSKLGAMPKSSYFGVQVFTYEELEEATNNFDASKELGDGGFGTVYKGDLKDGRVVAVKRHYESNFKRVTQFMNEVEILAKLRHKNLVTLYGCSSKHSRELLLVYEYIPNGTVADHIHGKQSSSYLLPWSVRFNIALETAEALAYLHASDVVHRDVKSNNILLDEKFHVKVADFGLSRWLPNDVTHVSTAPQGTPGYVDPEYYQCYQLNDKSDVYSFGVVLAELISSLQAVDITRHRSDVNLANMAVNKIQGQELHELVDPFLGYEKDSAVRRMTTAVGELAFRCLQQQRDMRPSMDEVVEVLRAIKSDELETQESKVLDVVVRTDELVLLNKGPYPASPNSVADKWVSGSSTSTSS 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03164 1191 SUPERFAMILY Protein kinase-like (PK-like) 845 1142 IPR011009 -
Vivi6g03164 1191 MobiDBLite consensus disorder prediction 1168 1191 - -
Vivi6g03164 1191 MobiDBLite consensus disorder prediction 807 835 - -
Vivi6g03164 1191 SMART serkin_6 865 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03164 1191 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 257 IPR044652 GO:0004672
Vivi6g03164 1191 MobiDBLite consensus disorder prediction 803 835 - -
Vivi6g03164 1191 Pfam Protein kinase domain 867 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03164 1191 Gene3D Transferase(Phosphotransferase) domain 1 942 1155 - -
Vivi6g03164 1191 FunFam Wall-associated receptor kinase-like 20 942 1150 - -
Vivi6g03164 1191 Gene3D Phosphorylase Kinase; domain 1 840 941 - -
Vivi6g03164 1191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 985 997 IPR008271 GO:0004672|GO:0006468
Vivi6g03164 1191 Pfam Wall-associated receptor kinase C-terminal 681 756 IPR032872 -
Vivi6g03164 1191 Pfam Wall-associated receptor kinase C-terminal 181 256 IPR032872 -
Vivi6g03164 1191 Pfam Wall-associated receptor kinase C-terminal 389 490 IPR032872 -
Vivi6g03164 1191 ProSitePatterns Protein kinases ATP-binding region signature. 871 893 IPR017441 GO:0005524
Vivi6g03164 1191 ProSiteProfiles Protein kinase domain profile. 865 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03164 1191 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 841 941 - -
Vivi6g03164 1191 Pfam Wall-associated receptor kinase galacturonan-binding 542 606 IPR025287 GO:0030247
Vivi6g03164 1191 Pfam Wall-associated receptor kinase galacturonan-binding 276 330 IPR025287 GO:0030247
Vivi6g03164 1191 Pfam Wall-associated receptor kinase galacturonan-binding 38 107 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03164 Vivi-Chr6 120958731 120965929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03164 547 1191 Receptor kinase-like Gene Family AT1G25390 42.470 1.94e-143 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi6g03164 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03164 - - cam:101490779 1733.77