Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03162 ATGAAACCTCTGCTTCATTATTCTTCTTCCATTATTGTTTTCTATTTCTCCTTTTCACTTTTGATAATCTTCATCATAAATTTTCCGAAGTGTCTATGCGATGATGATATCCAACACGCGAACTGCAATATTCCTTTTTCCTGCGACAGCAATATCACAAACCTCAAGTATCCATTCTGGGGAGAAAAAAGAGAAAGTTATTGTGGTGGTGTTGCTGATCGTACTAATACAAAGCTTACATGCGAAGAAAAAGTTTCAAAGATCACAATCAATAGCGTTAAGTATCGTATTCTCCAATGGGACAATACAACACAGAAACTCACAGTCGCTAGAGACGATTACTCTAGTGGTAATGTTTGTGCCGTGAATACTAATTACAAGAGCAGCACATTTGATAACACTCAATTTCAAGCTAACAACAGTAATGATAACTTGACGCTATTATACGGTTGCAATGTTAGAAGTGGAACTGTGGTTGATCAGAATCTTAATTATATCAACTGTGACGAAAGTGAATATGTTGTCTACATCGTTTATGATTCTGATTCGATTATTGCCAACTGTACTCCAACTCATATCGTTGAGATTCCCATTTTGAGAAGCCTAGCTGGAGAACTTGGATATGACAATAGAACTCTGAGCGAAGCATTAAAAGAAGGTTTTGAGTTGATATGGAGCGGAAACTATATGGACTGCCAGAGCTGCCTTGTTTCTGGTGGAGCGTGTGGGAATGATGGAGATACTGAATTCAGATGTTTCTGCGATAATGGAACTCATGCAACTTCATGCTTTTTGCCAGGGATCTCATCCTCACCCTCAAGTTCAAAACATAACTGGAGGCTTATTGTGATAGTGATAGGTGCTGCAGGATTTGGAGTAACAATGTTCTTTATAATTATTATGATTAGATGTCACCTTAAAAGGGGTACAGGTAGACAACAAAAGAGTATCTTCTGGAGAAGAAGAAAGCTTGTTGAGCACAATGTGGACACTTTTATGCAAAATTATAATTCATCTATGCCAAGAAGATATAGGTATAAAGAAGTAAAAAGGATCACAAACTCATTTCGAGAGAAATTAGGCCAAGGAGGATATGGTGTTGTGTACAAAGCAAGATTAAACGATGGTCGTCAAGTGGCAGTAAAACTTATAAACGAATCAAAGGGAAATGGAGAAGAATTCATAAACGAAGTTGCAAGCATTAGTAGAACATCACATATGAACATTGTGTCACTCTTAGGTTATTGTTATGAGGGGAACAAAAGAGCACTAATATATGAGTTCATGCCCAAAGGTTCATTGGATAAGTTCATCTATAAAAGTGAATTTCCTAATGCTATTTGTGATTTTGATTGGAACACTCTGTTCCAAATTGCAATAGGCATTGCTAGAGGACTAGAGTACTTGCATCAAGGATGCAACTCAAGGATTTTGCATCTTGATATCAAACCCCAAAACATTCTTTTAGATGAAGATTTTTGTCCAAAAATATCTGACTTTGGTTTGGCTAAAATATGCCAAAAGAAGGATAGTATTGTGTCAATACTAGGGACAAGAGGAACTATAGGATATATGGCACCTGAAATATTTAGTAGAGCATTTGGAGGAGTCTCTTACAAGTCTGATGTGTACAGTTATGGCATGCTGATTCTTGAGATGATTGGAGGAAGAAAGAACTATGAAACCGGAGGGTCGTGTACTTCTGAAATGTATTTTCCTGATTGGATTTATAAAGATCTTGACCAAGGTAATACTACTAACACTCTTTTAAATAGATTGACAATCTCAGAGGAAGAAAATGATATGGTTAGAAAGATTACTTTGGTGAGTCTATGGTGTATTCAAACGAATCCATCAGACAGACCACCGATGAATAAAGTAATAGAAATGCTACTAGGACCACTTTCATCAGTGTCATATCCTCCAAAGCCGGTCTTGTTTTCTGCTGAAATGCCAGCACTACAAGTAGACTCTATATCCTCCTCCGATTTGTACGAGACAAACTCAATTACAGTTTCAAAATAA 2025 0.3689 MKPLLHYSSSIIVFYFSFSLLIIFIINFPKCLCDDDIQHANCNIPFSCDSNITNLKYPFWGEKRESYCGGVADRTNTKLTCEEKVSKITINSVKYRILQWDNTTQKLTVARDDYSSGNVCAVNTNYKSSTFDNTQFQANNSNDNLTLLYGCNVRSGTVVDQNLNYINCDESEYVVYIVYDSDSIIANCTPTHIVEIPILRSLAGELGYDNRTLSEALKEGFELIWSGNYMDCQSCLVSGGACGNDGDTEFRCFCDNGTHATSCFLPGISSSPSSSKHNWRLIVIVIGAAGFGVTMFFIIIMIRCHLKRGTGRQQKSIFWRRRKLVEHNVDTFMQNYNSSMPRRYRYKEVKRITNSFREKLGQGGYGVVYKARLNDGRQVAVKLINESKGNGEEFINEVASISRTSHMNIVSLLGYCYEGNKRALIYEFMPKGSLDKFIYKSEFPNAICDFDWNTLFQIAIGIARGLEYLHQGCNSRILHLDIKPQNILLDEDFCPKISDFGLAKICQKKDSIVSILGTRGTIGYMAPEIFSRAFGGVSYKSDVYSYGMLILEMIGGRKNYETGGSCTSEMYFPDWIYKDLDQGNTTNTLLNRLTISEEENDMVRKITLVSLWCIQTNPSDRPPMNKVIEMLLGPLSSVSYPPKPVLFSAEMPALQVDSISSSDLYETNSITVSK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03162 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Vivi6g03162 674 ProSiteProfiles Protein kinase domain profile. 354 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03162 674 SUPERFAMILY Protein kinase-like (PK-like) 330 631 IPR011009 -
Vivi6g03162 674 Gene3D Transferase(Phosphotransferase) domain 1 429 638 - -
Vivi6g03162 674 FunFam Suppressor of npr1-1 constitutive 4 326 428 - -
Vivi6g03162 674 Pfam Protein kinase domain 357 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03162 674 PANTHER RUST RESISTANCE KINASE LR10-RELATED 326 651 IPR045874 GO:0004672
Vivi6g03162 674 SMART serkin_6 354 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03162 674 Gene3D Phosphorylase Kinase; domain 1 327 428 - -
Vivi6g03162 674 Pfam Wall-associated receptor kinase C-terminal 182 256 IPR032872 -
Vivi6g03162 674 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Vivi6g03162 674 FunFam PR5-like receptor kinase 429 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03162 Vivi-Chr6 120938206 120942262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03162 20 670 Receptor kinase-like Gene Family AT5G38260 40.774 2.84e-150 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi6g03162 Pkinase 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03162 - - psat:127126843 937.562