Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03157 ATGTTGAAAATGGGACATGAAACTGAACTCTGTTTGTCGAAATCATTTGGATTTGCGGGTACAAAGGATAAGTGTGCTGTTACGACCCAAAGGGCTTGTGGATTGAAATGGGCATGTGATGATAGGGAACTTGCTTCTGGTGAAGTTAGGCTTCTTTCAGCTGCAAAACACAAGAACCTTGTTGGTCTGGTTGGATATTGTGAACAACCAGAAAGAGATGGAGCAAAAATACTAGTCTATGAATATGTATCAAATGGAGCAGGAAAAGGCATAGCTTATTTGCATGAAGAGGTGAAGCCAAGTATAATTCATCGTGACATCAAACCAAGTAACATACTATTAGGGGAAGGTTTTGAGGCCAAAGTTTCAGATTTTGGGTTGGTAAAATCAGGACCTACTGGTGATCAATCACATGTCAGAAGTGTGAAGGGAGACTATATTTCTTTTTGTTTTAGAATCTAG 462 0.3939 MLKMGHETELCLSKSFGFAGTKDKCAVTTQRACGLKWACDDRELASGEVRLLSAAKHKNLVGLVGYCEQPERDGAKILVYEYVSNGAGKGIAYLHEEVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVKSGPTGDQSHVRSVKGDYISFCFRI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03157 153 Pfam Protein kinase domain 89 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03157 153 Gene3D Phosphorylase Kinase; domain 1 19 82 - -
Vivi6g03157 153 PANTHER OS01G0750732 PROTEIN 36 141 - -
Vivi6g03157 153 SUPERFAMILY Protein kinase-like (PK-like) 39 139 IPR011009 -
Vivi6g03157 153 Gene3D Transferase(Phosphotransferase) domain 1 83 148 - -
Vivi6g03157 153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 102 114 IPR008271 GO:0004672|GO:0006468
Vivi6g03157 153 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03157 Vivi-Chr6 120878324 120880463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03157 48 146 Receptor kinase-like Gene Family AT3G46290 40.000 3.78e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vivi6g03157 Pkinase 6.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03157 - - vvo:131609785 315.079