Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03156 ATGCATCTTCGCAAACTTCTTCCATTGCTTCATGGATATAAAACTATATCTACTCCATGGAAGATCAAGATCGCACTTAGGCTTCCTAACGTAGTCACCCACATTTTTCCATCAATTTTTTTCATCTTTTCCTTTCTCGTTATTGTCTTTGTTACTATTATTAATGGAGATGGAGATGCAGATTACATGTCTGATCTTATGAAAGCATTGACCCCAACTCCTACAGGCTGGTCTAACAATATACACTATTGCAAATGGAACGGCATCCTTTGCCAATCTAATCGCGTTGTTTCCATCAAACTCCCGTCAAGATCACTCTCTGGAACATTCCCTCCCAACTTCAACACTCTTACTAATATCACTCATATTGATCTCCATAACAACTCTCTCACGGGTCCTTTACCTAATTTATATGGTCTCGCCGCGCTTCAAACAGTGTCCCTTGGTCACAATATCTTCACCTCAATCCCACACGGTTGCTTTCTACTCTTGCATGATCTCAGAACCCTCAACCTTAGCAACAACCTGAATCTAGATCTATGGGCATTTCCTATCACTGATTTAACTTTTTCAACCTCTATGGAAACCATTGATCTCGAAGCTACTAACATGATCGGTTCATTACCACCGGACATGTTTAATACGTTTCCAAATTTGAATACTTTTATTCTTTCGCACAACAACATTACTGGAAGTTTACCCATATCTCTAGGTGAATCTAGAGTAAGATGTTTACGGCTCAATGACCAGGGAATTAGTCGGCTTACGGGTACAATTGATGTGATATCATCCATGACATTCTTGTCTCAGGCGTGGCTTGACAGTAACTTGTTCACAGGTTCAATACCTACCATGTTTAACACCACTTATTTGTCTGATCTCCAGCTCAAGAATAATCTCTTAACTGGTTTGGTTCCATCTTCCTTGCTCGCTCTCACTAGTTTGAACAACATCTCTTTGGACAACAATGCTCTTCAAGGACCAATACCTGTGTTTCCCAAGGGTGTTAAGGCAACTTGGGAAGGAAACAGATTTTGTCGAAATGATGTTGGACCTTGTGATCCCCAACTCACCATTATGCTTGAAATTATGGAAGCTTTTGGGTATCCTATTCCTTATTCAAGTAAAGGAAACGATGCTTGTACTCTAGGATTGGGGATTATCTGTCAAAAAGGGAAGATTGTGAGTATTGATTTCGGGAATGGGGGGTTCAATGGAACTATCTCTCCCGCATTTTCTAATTTAACAAGTTTAGTGAACTTAACCCTTGCTGGCAATTATTTGATGGGTTCAATACCAGACAGTCTTACAACTTTGCCTCAACTTCAGCTTCTAGATGTTTCTGATAATAATTTGTCCGGAAAAATTCCCAAATTTCCATTCAAGGTCAAATTAATCACAGAAGACAATGCATTGCTTAGCCAAAATATTTCTCAACAGCTAGGTGTTGGACAAAATGCTACTGCTTCTCGTGATAGAGGTGGACAAAATGCAACTGCTTCTCGTGATAGAGGTGGAGAAAATACTACCGCTGGGTCTAAAATTTATCACAGAGCTGTTTGGATTACAGGAGCATCTTTGTTAAGTGTTGGATTTGTAACATTTATTGTGATTGTTATCCGTAACCATGAGAGGTGTCTTATTTTAGTACAAAAATGGATCTTTAGAAAAACAATAAAATCTACTGACCATGATGTGGAGGATTTTATACAAAATTATAATCTGTCCGTGCCAATTAAGCAATACAGATATGCAGAAGTGAAAAGAATGACAAATTCATTCCGAGATAAATTAGGTCAAGGAGGCTATGGTATTGTGTATAAAGCAAACTTACCTGATGGTCGTCAAGTGGCAGTGAAAGTAATAAACGAGTCTAAGGGAAATGGAGAAGAATTTATAAATGAAGTTGCTAGCATTAGTAGAACGTCACATGTGAACATTGTCTCACTTTTAGGATTTTGTATTGAGAAAAAAAGAGCACTAATATATGAATTCATGTCCAAAGGATCATTAGACACATTCATCTTTAAAAGGGGATCTCCTGATGTTATTTGCAATTTGGATTGGAAAACATTGTACCAAATTGCAATCGGCATTGCTAGGGGACTAGAATATTTGCATCAAGGGTGTATTTCAAGGATTTTGCATCTTGATATCAAACCTCAGAACATTCTTTTGGATGATGATTTTTGTCCAAAAATCTCTGATTTTGGACTAGCAAAAATATGCCAAAGGAATGATAGTATTGTGTCTTTACTTGGCACAAGAGGAACTATGGGATTCATAGCACCAGAAGTATTTAGCCGATCATATGGTGGAGTTTCTCACAAATCAGATGTATACAGTTATGGCATGTTAATTCTAGAAATGATTGGAAAAAGAAACAATTATGATACTGCAGGATCATGTACTTCTGAAATGTGTTTTCCGGATTGGATTTATAAGAATCTTGAGCAAGATAATAACAGTGTGACGTGTTTAGCAAACTCAGACGAAGAAAATGACATGGTAAGAATGATTACTTTGGTGAGTCTATGGTGCATTCAAACAAATCCGTCAGATAGACCATCGATGAGTAAAGTAATAGAAATGCTACAAGGTTCACATCAGTCAATACCATTTCCTCCAAAACCTTACTTATATTCTCCTGAAGTGCCACCATTACAACAATCGTATGTGTCCTCCAACGATTTGTTAGAGACAAATTCATCAACCTTACTGAAGAGTGGTTCTATAAAGTCAAATAAGTTCAGCAAAGATTAA 2763 0.3757 MHLRKLLPLLHGYKTISTPWKIKIALRLPNVVTHIFPSIFFIFSFLVIVFVTIINGDGDADYMSDLMKALTPTPTGWSNNIHYCKWNGILCQSNRVVSIKLPSRSLSGTFPPNFNTLTNITHIDLHNNSLTGPLPNLYGLAALQTVSLGHNIFTSIPHGCFLLLHDLRTLNLSNNLNLDLWAFPITDLTFSTSMETIDLEATNMIGSLPPDMFNTFPNLNTFILSHNNITGSLPISLGESRVRCLRLNDQGISRLTGTIDVISSMTFLSQAWLDSNLFTGSIPTMFNTTYLSDLQLKNNLLTGLVPSSLLALTSLNNISLDNNALQGPIPVFPKGVKATWEGNRFCRNDVGPCDPQLTIMLEIMEAFGYPIPYSSKGNDACTLGLGIICQKGKIVSIDFGNGGFNGTISPAFSNLTSLVNLTLAGNYLMGSIPDSLTTLPQLQLLDVSDNNLSGKIPKFPFKVKLITEDNALLSQNISQQLGVGQNATASRDRGGQNATASRDRGGENTTAGSKIYHRAVWITGASLLSVGFVTFIVIVIRNHERCLILVQKWIFRKTIKSTDHDVEDFIQNYNLSVPIKQYRYAEVKRMTNSFRDKLGQGGYGIVYKANLPDGRQVAVKVINESKGNGEEFINEVASISRTSHVNIVSLLGFCIEKKRALIYEFMSKGSLDTFIFKRGSPDVICNLDWKTLYQIAIGIARGLEYLHQGCISRILHLDIKPQNILLDDDFCPKISDFGLAKICQRNDSIVSLLGTRGTMGFIAPEVFSRSYGGVSHKSDVYSYGMLILEMIGKRNNYDTAGSCTSEMCFPDWIYKNLEQDNNSVTCLANSDEENDMVRMITLVSLWCIQTNPSDRPSMSKVIEMLQGSHQSIPFPPKPYLYSPEVPPLQQSYVSSNDLLETNSSTLLKSGSIKSNKFSKD 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03156 920 SUPERFAMILY L domain-like 73 332 - -
Vivi6g03156 920 SMART serkin_6 592 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03156 920 Pfam Protein kinase domain 596 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03156 920 MobiDBLite consensus disorder prediction 484 509 - -
Vivi6g03156 920 Gene3D Ribonuclease Inhibitor 61 353 IPR032675 -
Vivi6g03156 920 Gene3D Transferase(Phosphotransferase) domain 1 666 872 - -
Vivi6g03156 920 SUPERFAMILY L domain-like 389 459 - -
Vivi6g03156 920 Gene3D Phosphorylase Kinase; domain 1 556 665 - -
Vivi6g03156 920 ProSitePatterns Protein kinases ATP-binding region signature. 598 620 IPR017441 GO:0005524
Vivi6g03156 920 ProSiteProfiles Protein kinase domain profile. 592 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03156 920 FunFam Leucine-rich repeat receptor-like kinase 355 476 - -
Vivi6g03156 920 Gene3D Ribonuclease Inhibitor 359 477 IPR032675 -
Vivi6g03156 920 FunFam PR5-like receptor kinase 666 876 - -
Vivi6g03156 920 SUPERFAMILY Protein kinase-like (PK-like) 570 865 IPR011009 -
Vivi6g03156 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Vivi6g03156 920 MobiDBLite consensus disorder prediction 484 508 - -
Vivi6g03156 920 PANTHER OSJNBA0070M12.3 PROTEIN 41 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03156 Vivi-Chr6 120863438 120870080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03156 433 898 Receptor kinase-like Gene Family AT1G66910 45.946 9.67e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi6g03156 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03156 - K00924 vvo:131612229 870.922