Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03155 ATGAAGACCTATCCCAAACGATTTGTTTTGTACTACTTTCTCATAATTGGGATTACAGTTATTATTGCAGAAAAAGATGATGATTACATTTACATGTCCAAACTTTTGAAAGCACTTACCCCAACACCTATAGGATGGTCTAACAACACTCACTTCTGCAAATGGAACGGCATCGTCTGTCGATCTAATCGAGTTGTTTCCATTAAACTCCCATCAAGCTCACTCCATGGGACACTCCCTTCTAGTCTCGACACTCTCACTAATCTCATCCATATTGATCTTCACAACAATTCACTCATCGGTCCTTTGCCTTTTATGTCTGGTCTCGTCGCACTACAAACTGTGTCCCTTAGTTACAATAACTTCACCTTTATCCCAGAATTTTACTTTATGGGAATGCCAGCTCTACAAACACTAAACCTTAGCAATAACTTGAATCTCTTGCCATGGTTATTCCCCAAGGAATTAAGTGAATCCCCGTTGATGCACACGCTCGATCTTGAAGCTACAAATATCTTAGGCTCTTTGCCATCTCAAATGTTCGATTGGTTTCCAAGTTTGTATACTCTTGTTCTTTCTCATAACAACATTCAAGGAGCTCTTCCCACGTCTCTTGGGAAATCCGGTGTAAGGTATTTAAAGCTCGACAATCAGCTGAATGGGTTCGAGGATACAATTGATATGTTATCATCTATGAAGTTTTTGTCTCAAGCATGGCTTCACAACAACGCCTTCAAGGGCCAAATTCCAAACTTGTCTAATTGCACTCATTTGTTCGATCTTCAACTTCATTCGAATCTCTTTGCTGGTGTAGTTCCACCTTCGCTGCTTGCTCTCTCTTCATTGACCACCATCTCTTTAGATGATAATTTACTTCAAGGGCCTATTCCTGTGTTTCACAAGGGTGTTAAGGCAACATGGAAAGGAAATCATTTTTGTAGAAGCGATGTTGGACCTTGTGATCCCCAAAATGCGACTTTGCTTGAAATTTTTAAAGCTCTTGAGTATTCTGTTTATCCGTCAAATAAAGGGAATGATTTTTGTTCAGACGAGGAATTGTTTACGTGTCGAAAAGGAAAGATTGTGGGTATTAATTTTGGGAATCTACAATTAGTAGGAACTATCTCTCTAGCGTTTTCCAATTTAACAAATTTAGTGATCTTGACTCTTGCTGGCAATAGTTTAACTGGGTCAATACCATATAGTCTTACAACTTTGCCTCATCTTCAGCTTCTTGATGTGTCCAATAATAATCTGCCTGGACAAATTCCCAAATTTCCATCCATTATTACGTTAATTATAAAAGGAAATGTTTTGCTTGGGCGAAATACGTCTGTTTCCCTTGAAGGAGGCTCATCTAAAACAGCACTTAGACCCGGTTGGATTGCAGGTATGAATGGGCGGGCCTCTTTGTTTAGTATTGGCATTGTAATACTTATTGTGGTGATTTCTTTTAAATGCAAGTGGTGTCCTGCTTTTATACAGAGGTGGATCTTCAAGAAAATTAAAAAATCTACTGACCATAATGTGGAAGATTTCATACAAAGTTATAATTTGTCAGTGCCAATTAAGCAATATAGATATGCTGAAGTGAAAAGAATGACAAATTCATTCCGAGATAAGTTAGGTCAAGGAGGATATGGCATTGTTTACAAGGCAATCTTACCTGATGGTCGTCACGTGGCAAGGAAAGTAATAAACGAAACAAAGGGAAATGGAGAAGATTTTATAAATGAAGTTGCTAGTATTAGTAGAACGTCACATGTGAACATCGTCGCACTTTTGGGTTTTTGTTATGAGAACAAAAGAGCACTAATATATGAATTTATGCCCAGAGGATCATTGGATACATTCATCTTTAAAAGGGGATTTTCTGATGTTATTTGTAATTTGGATTGGAAAACATTGTACCAAATTGCAATTGGCATTGCTCGAGGACTAGAATACTTGCATCAAGGATGTACTTCAAGGATTCTACATCTTGATATCAAACCTCAAAACATTCTTTTGGATGAAAATTTTTGCCCAAAAATCTCTGATTTTGGACTAGCGAAAATATGTCAGGAGAATGATAGTATTGTGTCTTTACTTGGCACAAGAGGTACTATAGGGTACATAGCACCAGAAGTATTTAGTCGAACATATGGTGGAGTTTCTCACAAGTCAGATGTATACAGCTACGGTATGTTAATTCTTGAAATGATTGGAGGAAGAAAAAATTATGATACTGGAGGATCATCTACTTCTGATATGTGTTTTCCAGATTGGATTTATAAGGATCTTGAGCAAGGTAATAACTTTGTAAAATGCTTAGAAAACTCAGAGGAAGAAAATGACATGGTAAGAATGATTACCATGGTTAGTCTATGGTGCATTCAAACGAATCCGTCAGATAGACCATCGATGAATAAAGTAATAGAAATGCTACAAGGATCACTTCAGGCATTGCCATTTCCTCCAAGGCCTTACTTATATACTCCTGAAATTCCATCATCACAACAGTTTTACCTGACTTCGAGTTATTTGTTAGAGACAAATTCATCAACCTTGTTGAAGATTGTAAATTCAAATAAGTCCGGCAAGGAAAAAAATGAAGAATGA 2601 0.3725 MKTYPKRFVLYYFLIIGITVIIAEKDDDYIYMSKLLKALTPTPIGWSNNTHFCKWNGIVCRSNRVVSIKLPSSSLHGTLPSSLDTLTNLIHIDLHNNSLIGPLPFMSGLVALQTVSLSYNNFTFIPEFYFMGMPALQTLNLSNNLNLLPWLFPKELSESPLMHTLDLEATNILGSLPSQMFDWFPSLYTLVLSHNNIQGALPTSLGKSGVRYLKLDNQLNGFEDTIDMLSSMKFLSQAWLHNNAFKGQIPNLSNCTHLFDLQLHSNLFAGVVPPSLLALSSLTTISLDDNLLQGPIPVFHKGVKATWKGNHFCRSDVGPCDPQNATLLEIFKALEYSVYPSNKGNDFCSDEELFTCRKGKIVGINFGNLQLVGTISLAFSNLTNLVILTLAGNSLTGSIPYSLTTLPHLQLLDVSNNNLPGQIPKFPSIITLIIKGNVLLGRNTSVSLEGGSSKTALRPGWIAGMNGRASLFSIGIVILIVVISFKCKWCPAFIQRWIFKKIKKSTDHNVEDFIQSYNLSVPIKQYRYAEVKRMTNSFRDKLGQGGYGIVYKAILPDGRHVARKVINETKGNGEDFINEVASISRTSHVNIVALLGFCYENKRALIYEFMPRGSLDTFIFKRGFSDVICNLDWKTLYQIAIGIARGLEYLHQGCTSRILHLDIKPQNILLDENFCPKISDFGLAKICQENDSIVSLLGTRGTIGYIAPEVFSRTYGGVSHKSDVYSYGMLILEMIGGRKNYDTGGSSTSDMCFPDWIYKDLEQGNNFVKCLENSEEENDMVRMITMVSLWCIQTNPSDRPSMNKVIEMLQGSLQALPFPPRPYLYTPEIPSSQQFYLTSSYLLETNSSTLLKIVNSNKSGKEKNEE 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03155 866 Gene3D Ribonuclease Inhibitor 32 320 IPR032675 -
Vivi6g03155 866 Gene3D Ribonuclease Inhibitor 323 443 IPR032675 -
Vivi6g03155 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Vivi6g03155 866 SMART LRR_typ_2 382 405 IPR003591 -
Vivi6g03155 866 SMART LRR_typ_2 406 432 IPR003591 -
Vivi6g03155 866 SMART LRR_typ_2 133 154 IPR003591 -
Vivi6g03155 866 SMART LRR_typ_2 184 208 IPR003591 -
Vivi6g03155 866 SMART LRR_typ_2 109 132 IPR003591 -
Vivi6g03155 866 Pfam Protein kinase domain 540 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03155 866 FunFam PR5-like receptor kinase 610 820 - -
Vivi6g03155 866 ProSiteProfiles Protein kinase domain profile. 536 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03155 866 Gene3D Transferase(Phosphotransferase) domain 1 610 816 - -
Vivi6g03155 866 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
Vivi6g03155 866 SMART serkin_6 536 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03155 866 SUPERFAMILY Protein kinase-like (PK-like) 513 809 IPR011009 -
Vivi6g03155 866 PANTHER OSJNBA0070M12.3 PROTEIN 11 812 - -
Vivi6g03155 866 Gene3D Phosphorylase Kinase; domain 1 498 609 - -
Vivi6g03155 866 FunFam Leucine-rich repeat receptor-like kinase 322 443 - -
Vivi6g03155 866 Pfam Leucine rich repeat 112 169 IPR001611 GO:0005515
Vivi6g03155 866 SUPERFAMILY L domain-like 46 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03155 Vivi-Chr6 120859820 120863172 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03155 455 832 Receptor kinase-like Gene Family AT1G66910 53.264 5.94e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi6g03155 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03155 - K00924 vvo:131612229 786.949