Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03154 ATGAAGATATTACTAAACCAACAAACTGTTTTCTTATCCATCCTCTTGTTCATTATTCCAATTGCTATTACTAATGCAGTATACGAAGAGTCAGATTACATGTCCGATCTTATAAAATCACTCACTCCAACTCCTTCTACTTGGTCAAATACGACTCACTACTGCAAATGGAAAGGCATCTTTTGCGAATCCAATCGAGTTGTGTCCATTAGCCTTCCATCAAGCTCACTCTCCGGAACGCTCCCTCCCCATCTCTACTCTCTCACTAATCTCACTCACATCGATCTCCACAACAATTCACTCACCGGTCCTTTGGCTAACTTTTCTGGTCTAGGCGCCCTCGAAGCCATATATCTCGGCCACAATAACTTCGACACAATCCCAAACGGTTGCTTTCAAGCAATTCCGTCTCTTAAAATACTTAACCTTAGCAATAACTTGAATCTACAACAATGGACTTTTGGAGGTGAAAAGGATTGGCTTAAATATGTTTGGATAGCAGGAGCATCAGTTGGATTTATAATATTTATTGGATTGATTATTTATTATCGTAAGGAGTGTCTTATTTTAGTACAAAGATGGATATTTAGGGGAACAACAAAATCTAGTGATCATATTGTGGAGAATTTTATGGAAAGTTATAAATTGTCAGTGCCGATAAAACAATATAGATATGCAGAAGTTAAAAGAATGACAAACTCATTCCGAGATAAATTAGGTCAAGGAGGATATGGTACTGTGTACAAAGCAAGCTTACCTGATGGTCGTCATGTGGCTGTGAAAGTAATAAAAGAGTCCAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCCAGCATTAGTAGAACATCACACGTCAATATTGTCTCGCTTTTGGGTTTTTGTTATGGAAACAAAAGAGCGCTGATATATGAATTCATGTCCAAAGGGTCATTGGATAATTTCATCCTTAAAAGTGGGTCTTCTGATTCTATTTGTAGTTTGGACTGGAACACATTGTCCAAAATTGCAATGGGCATTGCTCGTGGATTAGAATATTTGCATCAAGGATGTATTTCAAGGATATTACATCTTGATATCAAACCTCAAAATATTCTTTTGGATGAAGATTTTTGCCCAAAAATATCTGATTTTGGACTAGCTAAAATATGTCAAAGAGATGATAGTGTTGTGTCTATACTTGGTGCACGAGGAACTATAGGATATATAGCACCAGAAGTATTTAGTCGTACAAATGGCGGAGTTTCTCACAAATCAGATGTATACAGTTATGGTATGTTAATTTTAGATATGATTGGAAGAAGAAAGAATTCAGGTGCTAGAGATTCATGTACTTCTGAATATTTTCCGGATTGGATTTATAAAGATCTTGAGCAAGATAATAACTCTATGAATTGTATAGCAAATACGGAGGAAGAGAATGATATGGTGAGAAAAATTACTATGGTAAGTCTATGGTGCATTCAAACAAAACCATCAAATAGACCTTCAATTAGTAAAGTAATAGAAATGCTTCAAGCACCACTTCAGTCGGTTCCATATCCTCCCAAACCTTTTTTATATTCTCCTGAAATTCCAATATTGCAAACTTCATGCGTGCCTTCAAGCAGTTTGTCAGAGACAAAGTCATCAACCTTATCGAGGAATCGAGGAATGGTTCCATAA 1665 0.364 MKILLNQQTVFLSILLFIIPIAITNAVYEESDYMSDLIKSLTPTPSTWSNTTHYCKWKGIFCESNRVVSISLPSSSLSGTLPPHLYSLTNLTHIDLHNNSLTGPLANFSGLGALEAIYLGHNNFDTIPNGCFQAIPSLKILNLSNNLNLQQWTFGGEKDWLKYVWIAGASVGFIIFIGLIIYYRKECLILVQRWIFRGTTKSSDHIVENFMESYKLSVPIKQYRYAEVKRMTNSFRDKLGQGGYGTVYKASLPDGRHVAVKVIKESKGNGEEFINEVASISRTSHVNIVSLLGFCYGNKRALIYEFMSKGSLDNFILKSGSSDSICSLDWNTLSKIAMGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQRDDSVVSILGARGTIGYIAPEVFSRTNGGVSHKSDVYSYGMLILDMIGRRKNSGARDSCTSEYFPDWIYKDLEQDNNSMNCIANTEEENDMVRKITMVSLWCIQTKPSNRPSISKVIEMLQAPLQSVPYPPKPFLYSPEIPILQTSCVPSSSLSETKSSTLSRNRGMVP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03154 554 ProSitePatterns Protein kinases ATP-binding region signature. 239 261 IPR017441 GO:0005524
Vivi6g03154 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Vivi6g03154 554 Coils Coil 454 474 - -
Vivi6g03154 554 Pfam Protein kinase domain 237 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03154 554 PANTHER RUST RESISTANCE KINASE LR10-RELATED 206 531 IPR045874 GO:0004672
Vivi6g03154 554 Gene3D Ribonuclease Inhibitor 29 161 IPR032675 -
Vivi6g03154 554 SMART serkin_6 233 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03154 554 FunFam PR5-like receptor kinase 307 515 - -
Vivi6g03154 554 SUPERFAMILY Protein kinase-like (PK-like) 213 505 IPR011009 -
Vivi6g03154 554 SMART LRR_typ_2 111 134 IPR003591 -
Vivi6g03154 554 SMART LRR_typ_2 135 156 IPR003591 -
Vivi6g03154 554 SMART LRR_typ_2 88 110 IPR003591 -
Vivi6g03154 554 Gene3D Phosphorylase Kinase; domain 1 197 306 - -
Vivi6g03154 554 SUPERFAMILY L domain-like 41 150 - -
Vivi6g03154 554 MobiDBLite consensus disorder prediction 535 554 - -
Vivi6g03154 554 Pfam Leucine rich repeat 107 146 IPR001611 GO:0005515
Vivi6g03154 554 Gene3D Transferase(Phosphotransferase) domain 1 307 512 - -
Vivi6g03154 554 Pfam Leucine rich repeat N-terminal domain 36 62 IPR013210 -
Vivi6g03154 554 ProSiteProfiles Protein kinase domain profile. 233 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03154 Vivi-Chr6 120836673 120849586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03154 166 520 Receptor kinase-like Gene Family AT4G18250 53.425 4.31e-124 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi6g03154 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03154 - - vvo:131612225 1031.17