Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03153 ATGAAGACTTATCCCAAACGATTTGTTTTGTACTACTTTCTCATAATTGGGATTACAGTTATTATTGTAGAAAAAGATGATGATTACATTTACATGTCCAAACTTTTGAAAGCACTTACCCCAACACCTATAGGATGGTCTAACAACACTCACTTATGCAAATGGAACGACATCGTATGTCGATCTAATCGAGTTGTTTCCATTAAACTCCCATCAAGCTCACTCCAAGGGACACTCCCTTCTAGTCTCGACACTCTCACTAATCTCATCCATATTGATCTTCACAACAATTCACTCACCGGTCCTTTGCCTTTTATGTCTGGTCTCGTCGCACTACAAACTGTGTCCCTTAGTTACAATAACTTCACCTCTATCCCAGAATTTTACTTTATGGGAATGCCAGCTCTACAAACACTAAACCTTAGCAATAACTTGAATCTCTTGCCGTGGTTATTCCCTAAGGAATTAAGTGAGTGCTCGTTGATGCACACGCTCGATCTTGAAGCTACAAATATCTTAGGCTCCTTGCCATCTCAAATGTTCGATTGGTTTCCTAGTTTGTATTCTCTTGTTCTTTCTCATAACAACTTTCAAGGATCTCTTCCCGCGTCTCATGGGAAATCTGGTGTAAGGTATTTAAAGCTCGACAATCAGCTGAATAGGTTCGAGGATACAATTGATATGTTATCATCTATGAAATTTTTGTCTCAAGCATGGCTTCACAACAACGCCTTCAAGGGCGAAATTCCCAACTTATCTAATTGCACTCATTTGTTCGATCTTCAACTTCATTCGAATCTCTTTGCTGGTTTAGTTCCACCTTCGTTGCTTGCTCTCTCTTCCTTGACCACCATCTCTTTAGATGATAATTTACTTAAAGGGCCTATACCTGTGTTTCACAAGGGTGTTAAGGCAACATGGAAAGGAAATCATTTTTGTAGAAGCGATGTTGGACCTTGTGATCCCAAAGATGCGATTTTGCTTGAAATTTTTAAAGCTCTTGAGTATTCTGTTTATCCGTCAAATAAAGGGAATGATTTTTGTTCAGATGAGGAATTGTTTACGTGTCGAAAAGGAAAGATTGTGGGTATTAATTTTGGGAATCTACAATTAGTAGGAACTATTTCTCCAGCATTTTCCAATTTAACAAATTTAGTGATCTTGACTCTTGCTGGCAATAGTTTAACTGGACCAATACCATATAGTCTAACAACTTTGCCTCATCTTCAGCTTCTTGATGTGTCCAATAATAATCTGTCTGGACAAATTCCAAAATTTCCATCCAACATTAACTTAATTACAAATGGAAATGTTTTGCTTGGGCAAAATACGTCTGTTTCGCTTGATGGAGGCTCATCTAAAACAACACTAAGACCTGGTTGGATTGCAGGGGCCTCTTTGTTTAGTATTGGCATTGTAATACTTATTGTGGTGATTTCTTTTAAATGCAAGTGGTGTCCTGCTTTTATACAGAGGTGGATCTTCAAGAAAATTAAAAAATCTACTGACCATAATGTGGAAGATTTCATACAGAGTTATAATTTGTCAGTGCCAATTAAGCAATATAGATATGCTGAAGTGAAAAGAATGACAAATTCATTCCGAGATAAGTTAGGTCAAGGAGGATATGGCATTGTTTACAAAGCAATCTTACCTAATGGTCGTCAAGTGGAAGTGAAAGTAATAAACGAAACAAAGGGAAATGGAGAAGAATTTATAAATGAAGTTGCTAGTATTAGTAGAACGTCACATGTGAACATCGTCGCACTTTTGGGTTTTTGTTATGAGAACAAAAGAGCACTAATATATGAATTCATGCCCAGAGGATCATTGGATACATTCATCTTTAAAAGGGGATTTTCTGATGTTATTTGTAATTTTTATTGGAAAACATTGTACCAAATTGCAATTGGCATTGCTCGAGGACTAGAATACTTGCATCAAGGATGTACTTCAAGGATTCTCCATCTTGATATCAAACCTCAAAACATTCTTTTGGATGAAAATTTTTGCCCAAAAATCTCTGATTTTGGACTAGAAAAAATATGTCAGAGGAATGATAGTATTGTGTCTTTACTTGGTAAAAGAGGTACTATAGGGTACATAGCACTAGAAGTATTTAGTCGAACATATGGTGGAGTTTCTCACAAGTCAGATGTATACAGCTACGGTATGTTAATTCTTGAAATGATTGGAGGAAGAAAAAATTATGATAATGGAGGATCATCTACTTCTGATATGTGTTTTCCAGACTGGATTTATAAGGATCTCGAGCAAGGTAATAACTTTGTAAAATGCATAGAAAACTCAGAGGAAGAAAAAGGCATGGTAAGAATGATTACCATGGTCAATCTATGGTGCATTCAAACAAATCCGTTAGATAAACCATCGATGAATAAAGTAATAGAAATGTTACAAGGATCACTTCAGGCATTGCCATTTCCTCCAAAGCCTTACTTATATACTCCTAAAATTCCATCATCACAACAGTCTTCGTGTCTTCGAGTTATTTGTTAG 2517 0.3639 MKTYPKRFVLYYFLIIGITVIIVEKDDDYIYMSKLLKALTPTPIGWSNNTHLCKWNDIVCRSNRVVSIKLPSSSLQGTLPSSLDTLTNLIHIDLHNNSLTGPLPFMSGLVALQTVSLSYNNFTSIPEFYFMGMPALQTLNLSNNLNLLPWLFPKELSECSLMHTLDLEATNILGSLPSQMFDWFPSLYSLVLSHNNFQGSLPASHGKSGVRYLKLDNQLNRFEDTIDMLSSMKFLSQAWLHNNAFKGEIPNLSNCTHLFDLQLHSNLFAGLVPPSLLALSSLTTISLDDNLLKGPIPVFHKGVKATWKGNHFCRSDVGPCDPKDAILLEIFKALEYSVYPSNKGNDFCSDEELFTCRKGKIVGINFGNLQLVGTISPAFSNLTNLVILTLAGNSLTGPIPYSLTTLPHLQLLDVSNNNLSGQIPKFPSNINLITNGNVLLGQNTSVSLDGGSSKTTLRPGWIAGASLFSIGIVILIVVISFKCKWCPAFIQRWIFKKIKKSTDHNVEDFIQSYNLSVPIKQYRYAEVKRMTNSFRDKLGQGGYGIVYKAILPNGRQVEVKVINETKGNGEEFINEVASISRTSHVNIVALLGFCYENKRALIYEFMPRGSLDTFIFKRGFSDVICNFYWKTLYQIAIGIARGLEYLHQGCTSRILHLDIKPQNILLDENFCPKISDFGLEKICQRNDSIVSLLGKRGTIGYIALEVFSRTYGGVSHKSDVYSYGMLILEMIGGRKNYDNGGSSTSDMCFPDWIYKDLEQGNNFVKCIENSEEEKGMVRMITMVNLWCIQTNPLDKPSMNKVIEMLQGSLQALPFPPKPYLYTPKIPSSQQSSCLRVIC 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03153 838 ProSiteProfiles Leucine-rich repeat profile. 111 132 IPR001611 GO:0005515
Vivi6g03153 838 Gene3D Ribonuclease Inhibitor 324 444 IPR032675 -
Vivi6g03153 838 SUPERFAMILY Protein kinase-like (PK-like) 509 805 IPR011009 -
Vivi6g03153 838 SUPERFAMILY L domain-like 43 433 - -
Vivi6g03153 838 ProSiteProfiles Protein kinase domain profile. 532 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03153 838 Gene3D Phosphorylase Kinase; domain 1 494 605 - -
Vivi6g03153 838 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Vivi6g03153 838 FunFam PR5-like receptor kinase 606 816 - -
Vivi6g03153 838 PANTHER OSJNBA0070M12.3 PROTEIN 12 808 - -
Vivi6g03153 838 Gene3D Transferase(Phosphotransferase) domain 1 606 812 - -
Vivi6g03153 838 SMART serkin_6 532 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03153 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Vivi6g03153 838 FunFam Leucine-rich repeat receptor-like kinase 322 443 - -
Vivi6g03153 838 Gene3D Ribonuclease Inhibitor 32 320 IPR032675 -
Vivi6g03153 838 Pfam Protein tyrosine and serine/threonine kinase 534 805 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03153 Vivi-Chr6 120828593 120832367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03153 455 832 Receptor kinase-like Gene Family AT1G66910 51.958 2.13e-120 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi6g03153 PK_Tyr_Ser-Thr 9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03153 - K00924 vvo:131612229 750.355