Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03152 ATGAAGATATTACTAAACCAACAAACTGTTTTCTTATCCATCCTCTTGTTCATTATTTCAATTGCTATTACTAAAGCAGAATACCAAGAGGCAGATTACATGTCCGATCTTATAAAATCACTCACTCCAACTCCTTCTACTTGGTCTAATACCACTCACTACCCGAGGCTAGATATTGTTGTTCTTTCGCACAACAACATCGTGGGACCACTTCCTCAGTCTCTTGGGAGTTCGGTAGTAAGATATTTAAGGGTCAATAACCAAGAGAATCAGAATGGATTTAATGACACACTTGATGTGATATCATCCATGACATTCTTGCGTCAAGCGTGGCTTAACAACAACTTTTTCCAGGGTTCAATTCCTAACAGGTTTGCTTCGAAAAATTTGTCTGACCTGCAGCTTCAATCAAATTGGTTAATCGGTTTGGTTCCGCCTTCATTGCTAGCTCTCACTAGCTTGAACAACATCTCTTTGGACGACAATTTTTTCCAAGGACCAATACCTGTGTTTCCCAAGCGCGTCAAGGCAACTTGGAAAGGAAATCCTTTTTGTGAAAGCCATGCAGGACATTGTGATCCACAAATTACAATTGGTGATGGATTTCCTCTTTTATTGACAAGTTTAGTGAACTTAACTCTTGCTGGAAATAAATTGACAGGTTTGATACCAGAGAGTCTAACAACATTGCCTAATCTTCAACTTCTTGATATTTCTCATAACAATCTGTCGGGAAAAATTCCCAAATTTTCATCCAAGGTTAAGTTATTTACTCAAGGAAATCCTTTGCTTGGCCTAAATATTTCCGGAGATGGTAGAGGTAAAAATGCAACTCATTCCGGAGATGATGTTCCGACAAGAAAAAGTGGAGGTGAAAAGGATTGGCTTAAATATGTTTGGATAGCAGGAGCATCTGTTGGATTTATAATATTTATTGGATTGACTATTTATTATCGTAAGGAGTGTCTTATTTTAGTACAAAGATGGATATTTAGGGGAACAATAAAATCTAGTCATCATATTGTGGAGAATTTTATGGAAAGTTATAAACTGTCAGTGCCGATAAAACAATATAGATATGCAGAAGTGAAAAGAATGACAAACTCATTTCGAGATAAATTAGGTCAAGGAGGATATGGTACTGTGTACAAAGCAAGCTTATCTGATGGTCGTCAAGTGGCTGTGAAAGTAATAAAAGAGTCCAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGCATTAGTAGAACATCACACGTCAATATTGTCTCACTTTTGGGTTTTTGTTATGGAAACAAAAGAGCGTTGATATATGAATTCATGTCCAAAGGGTCACTGGATAATTTCATCCTTAAAAGTGGGTCTTCTGATTCTGTTTGTAGTTTGGATTGGAACACATTATCCAAAATTGCAATGGGCATTGCTCGTGGATTAGAATACTTGCATCAAGGATGTATTTCAAGGATATTGCATCTTGATATCAAACCTCAAAATATTCTTTTGGATGAAGATTTTTGCCCAAAAATATCTGATTTTGGACTAGCTAAAATATGTCAAAGAGATGATAGTGTTGTGTCTATACTTGGTGCACGAGGAACTATAGGATATATAGCTCCAGAAGTATTTAGTCGAACAAATGGCAGAGTTTCTCACAAATCAGATGTATACAGTTATGGTATGTTAATTTTAGATATGATTGGAAGAAGAAAGAATTCAGGCGCTAGAGATTCATGTACTTCTGAATATTTTCCAGATTGGATTTATAAAGATCTTGAACAAGAAAATAACTCTGTGAATTGTATAGAAAATTTGGAGGAAGAGAATGATATGGTGAGAAAAATTACTATGGTAAGTCTATGGTGCATTCAAACAAAACCATCAGATAGACCTTCAATTAGTAAAGTAATAGAAATGCTACAAGGACCACTTCAGTCGGTTCCATATCCTCCCAAACCTTTTTTATATTCTCCTGAAATTCCAATATTGCAAACTTCATGTGTGCCTTCAAGCAGTTTGTCAGAGACAAAGTCATCAACCTTATCGAAGAATGGTTCCATAAAAACAAATAAGTTCAGCAAAGACAACAATGAAGATGTGATTGTAGTGTAA 2112 0.358 MKILLNQQTVFLSILLFIISIAITKAEYQEADYMSDLIKSLTPTPSTWSNTTHYPRLDIVVLSHNNIVGPLPQSLGSSVVRYLRVNNQENQNGFNDTLDVISSMTFLRQAWLNNNFFQGSIPNRFASKNLSDLQLQSNWLIGLVPPSLLALTSLNNISLDDNFFQGPIPVFPKRVKATWKGNPFCESHAGHCDPQITIGDGFPLLLTSLVNLTLAGNKLTGLIPESLTTLPNLQLLDISHNNLSGKIPKFSSKVKLFTQGNPLLGLNISGDGRGKNATHSGDDVPTRKSGGEKDWLKYVWIAGASVGFIIFIGLTIYYRKECLILVQRWIFRGTIKSSHHIVENFMESYKLSVPIKQYRYAEVKRMTNSFRDKLGQGGYGTVYKASLSDGRQVAVKVIKESKGNGEEFINEVASISRTSHVNIVSLLGFCYGNKRALIYEFMSKGSLDNFILKSGSSDSVCSLDWNTLSKIAMGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQRDDSVVSILGARGTIGYIAPEVFSRTNGRVSHKSDVYSYGMLILDMIGRRKNSGARDSCTSEYFPDWIYKDLEQENNSVNCIENLEEENDMVRKITMVSLWCIQTKPSDRPSISKVIEMLQGPLQSVPYPPKPFLYSPEIPILQTSCVPSSSLSETKSSTLSKNGSIKTNKFSKDNNEDVIVV 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03152 703 SMART serkin_6 368 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03152 703 MobiDBLite consensus disorder prediction 268 289 - -
Vivi6g03152 703 Gene3D Ribonuclease Inhibitor 36 191 IPR032675 -
Vivi6g03152 703 ProSiteProfiles Protein kinase domain profile. 368 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03152 703 Pfam Leucine rich repeat 208 245 IPR001611 GO:0005515
Vivi6g03152 703 SUPERFAMILY L domain-like 52 263 - -
Vivi6g03152 703 PANTHER RUST RESISTANCE KINASE LR10-RELATED 339 668 IPR045874 GO:0004672
Vivi6g03152 703 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Vivi6g03152 703 Gene3D Phosphorylase Kinase; domain 1 342 441 - -
Vivi6g03152 703 Gene3D Ribonuclease Inhibitor 192 268 IPR032675 -
Vivi6g03152 703 SUPERFAMILY Protein kinase-like (PK-like) 348 640 IPR011009 -
Vivi6g03152 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Vivi6g03152 703 Gene3D Transferase(Phosphotransferase) domain 1 442 647 - -
Vivi6g03152 703 FunFam PR5-like receptor kinase 442 650 - -
Vivi6g03152 703 Pfam Protein kinase domain 372 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03152 Vivi-Chr6 120808686 120812184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03152 347 674 Receptor kinase-like Gene Family AT1G66910 55.988 2.38e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi6g03152 Pkinase 7.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03152 - K00924 vvo:131612229 1391.33