Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03151 ATGATGAGAAGAGCATCTGTTGGATTTATAATATTTATTGGATTGGTTATTTATTATCGTAAGGAGTGTCTTATTTTAGTACAAAGATGGATATTTAGGGGAACAATAAAATCTAGTGATCATATTGTGGAGAATTTTATGGAAAGTTATAAACTGTCAGTGCCGATAAAACAATATAGATATGCAGAAGTAAAAAGAATGACAAACTCATTTCGAGATAAATTAGGTCAAGGAGGATATGGTACTGTGTACAAAGCAAGCTTACCTGATGGTCGTCAAGTGGCTGTGAAAGTAATAAAAGAGTCCAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGCATTAGTAGAACATCACACGTCAATATTGTCTCACTTTTGGGTTTTTGTTATGGAAACAAAAGAGCGTTGATATATGAATTCATGTCCAAAGGGTCATTGGATAATTTCATCCTTAAAAGTGGGTCTTCTCATTCTGTTTGTAGTTTGGATTGGAACACATTATCCAAAATTGCAATGGGAATTGCTCGAGGCTTAGAATACTTGCATCAAGGATGTATTTCAAGGATATTGCATCTTGATATCAAACCTCAAAATATTCTTTTGGATGAAGATTTTTGCCCAAAAATATCTGATTTTGGACTAGCTAAAATATGTCAAAGAGATGATAGTGTTGTGTCTATACTTGGTGCACGAGGAACTATAGGATATATAGCTCCAGAAGTATTTAGTCGAACAAATGGCGGAGTTTCTCACAAATCAGATGTATACAGTTATGGTATGTTAATGTTAGATATGATTGGAAGAAGAAAGAATTCAGGCGCTAGAGATTCATGTACTACTGAATATTTTCCAGATTGGATTTATAAAGATCTTGAGCAAGATAATAACTCTGTGAATTGTATAGCAAATTCGGAGGAAGAGAATGATATGGTGAGAAAAATTACTATGGTAAGTCTATGGTGCATTCAAACAAAACCATCAGATAGACCTTCAATTAGTAAAGTAATAGAAATGCTACAAGGACCACTTCAGTCGGTTCCATATCCTCCCAAACCTTTTTTAAACTCTCCTGAAATTCCAATATTGCAAACTTCATGCGTGCCTTCAAGCAGTTTGTCAGAAACAAAGTCATCAACCTTATCGGGGAATGCTTCCATAAAAACAAATAAGTTCAGCAAAGACAACAATGAAGATGTGATTGTAGTGTAA 1215 0.3424 MMRRASVGFIIFIGLVIYYRKECLILVQRWIFRGTIKSSDHIVENFMESYKLSVPIKQYRYAEVKRMTNSFRDKLGQGGYGTVYKASLPDGRQVAVKVIKESKGNGEEFINEVASISRTSHVNIVSLLGFCYGNKRALIYEFMSKGSLDNFILKSGSSHSVCSLDWNTLSKIAMGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQRDDSVVSILGARGTIGYIAPEVFSRTNGGVSHKSDVYSYGMLMLDMIGRRKNSGARDSCTTEYFPDWIYKDLEQDNNSVNCIANSEEENDMVRKITMVSLWCIQTKPSDRPSISKVIEMLQGPLQSVPYPPKPFLNSPEIPILQTSCVPSSSLSETKSSTLSGNASIKTNKFSKDNNEDVIVV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03151 404 ProSiteProfiles Protein kinase domain profile. 69 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03151 404 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Vivi6g03151 404 SUPERFAMILY Protein kinase-like (PK-like) 49 341 IPR011009 -
Vivi6g03151 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Vivi6g03151 404 Gene3D Phosphorylase Kinase; domain 1 43 142 - -
Vivi6g03151 404 Gene3D Transferase(Phosphotransferase) domain 1 143 348 - -
Vivi6g03151 404 FunFam PR5-like receptor kinase 143 351 - -
Vivi6g03151 404 SMART serkin_6 69 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03151 404 Coils Coil 290 310 - -
Vivi6g03151 404 PANTHER RUST RESISTANCE KINASE LR10-RELATED 43 366 IPR045874 GO:0004672
Vivi6g03151 404 Pfam Protein kinase domain 73 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03151 Vivi-Chr6 120786676 120788276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03151 23 375 Receptor kinase-like Gene Family AT1G66910 53.482 9.69e-128 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi6g03151 Pkinase 8.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03151 - - vvo:131612225 776.548