Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03149 ATGAAGACCTATCCCAAACGATTTGTTTTGTACTACTTTCTCATAATTGGGATTACAGTTATTATTGTAGAAAAAGATGATGATTACATTTACATGTCCAAACTTTTGAAAGCACTTACCCCAACACCTATAGGATGGTCTAACAACACTCACTTATGCAAATGGAACGACATCGTATGTCGATCTAATCGAGTTGTTTCCATTAAACTCCCATCAAGCTCACTCCAAGGGACACTCCCTTCTAGTCTCGACACTCTCACTAATCTCATCCATATTGATCTTCACAACAATTCACTCACCGGTCCTTTGCCTTTTATGTCTGGTCTCGTCGCACTACAAACTGTGTCCCTTAGTTACAATAACTTCACCTCTATCCTAGAATTTTACTTTATGGGAATGCCAGCTCTACAAACACTAAACCTTAGCAATAACTTGAATCTCTTGCCGTGGTTATTCCCTAAGGAATTAAGTGAGTGCTCGTTGATGCACACGCTCGATCTTGAAGCTACAAATATCTTAGGCTCCTTGCCATCTCAAATGTTCGATTGGTTTCCTAGTTTGTATTCTCTTGTTCTTTCTCATAACAACTTTCAAGGATCTCTTCCCGCGTCTCATGGGAAATCTGGTGTAAGGTATTTAAAGCTCGACAATCAGCTGAATAGGTTCGAGGATACAATTGATATGTTATCATTTATGAAGTTTTTGTCTCAAGCATGGCTTCACAACAACGCCTTCAAGGGCGAAATTCCCAAATTATCTAATTGCACTCATTTGTTCGATCTTCAACTTCATTCGAATCTCTTTGCTGGTTTAGTTCCACCTTCGTTGCTTGCTCTCTCTTCCTTGACCACCATCTCTTTAGATGATAATTTACTTAAAGGGCCTATACCTGTGTTTCACAAGGGTGTTAAGGCAACATGGAAAGGAAATCATTTTTGTAGAAGTGATGTTGGACCTTGTGATCCCCAAGATGCGATTTTGCTTGAAATTTTTAAAGCTCTTGAGTATTCTGTTTATCCGTCAAATAAAGGGAATGATTTTTGTTCAGATGAGGAATTGTTTACGTGTCGAAAAGGAAAGATTGTGGGTATTAATTTTGGGAATCTACAATTAGTAGGAACTATTTCTCCAGCATTTTCCAATTTAACAAATTTAGTGATCTTGACTCTTGCTGGCAATAGTTTAACTGGACCAATACCATATAGTCTTACAACTTTGCCTCATCTTCAGCTTCTTGATGTGTCCAATAATAATCTGTCTGGACAAATTCCAAAATTTCCATCCAACATTAACTTAATTACAAATGGAAATGTTTTGCTTGGGCAAAATACGTCTGTTTCGCTTGATGGAGGCTCATCTAAAACAACACCAAGACCTGGTTGGATTGCAGGGGCCTCTTTGTTTAGTATTGGCATTGTAATACTTATTGTGGTGATTTCTTTTAAATGCAAGTGGTGTCCTGCTTTTATACAGAGGTGGATCTTCAAGAAAATTAAAAAATCTACTGACCATAATGTGGAAGATTTCATACAGAGTTATAATTTGTCAGTGCCAATTAAGCAATATAGATATGCTGAAGTGAAAAGAATGACAAATTCATTCCGAGATAAGTTAGGTCAAGGAGGATATGGCATTGTTTACAAAGCAATCTTACCTAATGGTCGTCAAGTGGAAGTGAAAGTAATAAACGAAACAAAGGGAAATGGAGAAGAATTTATAAATGAAGTTGCTAGTATTAGTAGAACGTCACATGTGAACATCGTCGCACTTTTGGGTTTTTGTTATGAGAACAAAAGAGCACTAATATATGAATTCATGCCCAGAGGATCATTGGATACATTCATCTTTAAAAGGGGATTTTCTGATGTTATTTGTAATTTTTATTGGAAAACATTGTACCAAATTGCAATTGGCATTGCTCGAGGACTAGAATACTTGCATCAAGGATGTACTTCAAGGATTCTCCATCTTGATATCAAACCTCAAAACCTTCTTTTGGATGAAAATTTTTGCCCAAAAATCTCTGATTTTGGACTAGCAAAAATATGTCAGAGGAATGATAGTATTGTGTCTTTACTTGGTAAAAGAGGTACTATAGGGTACATAGCACTAGAAGTATTTAGTCGAACATATGGTGGAGTTTCTCACAAGTCAGATGTATACAGCTACGATATGTTAATTCTTGAAATGATTGGAGGAAGAAAAAATTATGATACTGGAGGATCATCTACTTCTGATATGTGTTTTCCAGACTGGATTTATAAGGATCTCGAGCAAGGTAATAACTTTGTAAAATGCATAGAAAACTCAGAGGAAGAAAATGGCATGGTAAGAATGATTACCATGGTCAGTCTATGGTGCATTCAAACAAATCCGTTAGATAAACCATCGATGAATAAAGTAATAGAAATGTTACAAGGATCACTTCAGGCATTGCCATTTCCTCCAAAGCCTTACTTATATACTCCTGAAATTCCATCATCACAACAGTCTTACGTGTCTTCGAGTTATTTGTTAGAGACAAATTCATCAACCTTGTTGAAGATTGTAAATTCAAATAAGTCCGGCAAGGTAAAAAATGAAGAATGA 2589 0.3638 MKTYPKRFVLYYFLIIGITVIIVEKDDDYIYMSKLLKALTPTPIGWSNNTHLCKWNDIVCRSNRVVSIKLPSSSLQGTLPSSLDTLTNLIHIDLHNNSLTGPLPFMSGLVALQTVSLSYNNFTSILEFYFMGMPALQTLNLSNNLNLLPWLFPKELSECSLMHTLDLEATNILGSLPSQMFDWFPSLYSLVLSHNNFQGSLPASHGKSGVRYLKLDNQLNRFEDTIDMLSFMKFLSQAWLHNNAFKGEIPKLSNCTHLFDLQLHSNLFAGLVPPSLLALSSLTTISLDDNLLKGPIPVFHKGVKATWKGNHFCRSDVGPCDPQDAILLEIFKALEYSVYPSNKGNDFCSDEELFTCRKGKIVGINFGNLQLVGTISPAFSNLTNLVILTLAGNSLTGPIPYSLTTLPHLQLLDVSNNNLSGQIPKFPSNINLITNGNVLLGQNTSVSLDGGSSKTTPRPGWIAGASLFSIGIVILIVVISFKCKWCPAFIQRWIFKKIKKSTDHNVEDFIQSYNLSVPIKQYRYAEVKRMTNSFRDKLGQGGYGIVYKAILPNGRQVEVKVINETKGNGEEFINEVASISRTSHVNIVALLGFCYENKRALIYEFMPRGSLDTFIFKRGFSDVICNFYWKTLYQIAIGIARGLEYLHQGCTSRILHLDIKPQNLLLDENFCPKISDFGLAKICQRNDSIVSLLGKRGTIGYIALEVFSRTYGGVSHKSDVYSYDMLILEMIGGRKNYDTGGSSTSDMCFPDWIYKDLEQGNNFVKCIENSEEENGMVRMITMVSLWCIQTNPLDKPSMNKVIEMLQGSLQALPFPPKPYLYTPEIPSSQQSYVSSSYLLETNSSTLLKIVNSNKSGKVKNEE 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03149 862 SUPERFAMILY Protein kinase-like (PK-like) 520 841 IPR011009 -
Vivi6g03149 862 Gene3D Transferase(Phosphotransferase) domain 1 606 812 - -
Vivi6g03149 862 Gene3D Phosphorylase Kinase; domain 1 494 605 - -
Vivi6g03149 862 Gene3D Ribonuclease Inhibitor 32 320 IPR032675 -
Vivi6g03149 862 SMART serkin_6 532 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03149 862 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Vivi6g03149 862 FunFam PR5-like receptor kinase 606 816 - -
Vivi6g03149 862 ProSiteProfiles Protein kinase domain profile. 532 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03149 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Vivi6g03149 862 SUPERFAMILY L domain-like 43 433 - -
Vivi6g03149 862 FunFam Leucine-rich repeat receptor-like kinase 322 443 - -
Vivi6g03149 862 Gene3D Ribonuclease Inhibitor 324 444 IPR032675 -
Vivi6g03149 862 PANTHER OSJNBA0070M12.3 PROTEIN 12 809 - -
Vivi6g03149 862 Pfam Protein tyrosine and serine/threonine kinase 534 805 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03149 Vivi-Chr6 120742890 120746735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03149 469 845 Receptor kinase-like Gene Family AT4G18250 49.873 3.51e-119 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi6g03149 PK_Tyr_Ser-Thr 3.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03149 - K00924 vvo:131612229 770