Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03148 ATGAAGATATTACTAAACCAACAAACTGTTTTCTTATCCATCCTCTTTTTCATTATTTCAATTGCTATTACTAATGCAGAATACCAAGAGGCAGATTACATGTCCCATCTTATAAAATCACTCACTCCAACTCCTTCTACTTGGTCTAATACCACTCACTACTGCAAATGGAATGGTATCTTTTGCAAATCTAATCGAGTTGTGTCCATTAACCTTCCATCAAGCTCACTCTCCGGAACACTCCCTCCCCATCTCTACGCTCTCACTAATCTCACTCGCATCGATCTCCACAACAATTCACTCAACGGTCCTTTGGCTAACTTTTCTGGTCTAGGCGCCCTCGAAGCCATATACCTCGGCCACAATAATTTTAACACAATCCCAAACGGTTGCTTTCAAGCAATTCCGTCTCTTCAAATACTTAACCTTAGCAATAACTTGAATCTACAACAATGGACTTTTACTAAGAATTTAATTGATTCCTACTTTTTGCGTGTCCTTGATCTTGAAGCTACAAATATCGGAGAATCATTACCATCGGAAATGTTTGATCCCTACCCGAGGCTAGATATTGTTGTTCTTTCGCACAACAACATCGTGGGACCACTTCCTCAGTCTCTTGGGAGTTCGGTAGTAAGATATTTAAGGGTCAATAACCAAGAGAATCAGAATGGATTTAATGACACACTTGATGTGATATCATCCATGACATTCTTGCGTCAAGCGTGGCTTAACAACAACTTTTTTCAGGGTTCAATTCCTAACAGGTTTGCTTCGACAAATTTGTCTGACCTGCAGCTTCAATCAAATTGGTTAATCGGTTTGGTTCCGCCTTCATTGCTAGCTCTCACTAGCTTGAACAACATCTCTTTGGACGACAATTTTTTCCAAGGACCAATACCTGTGTTTCCCAAGCGCGTCAAGGCAACTTGGAAAGGAAATCCTTTTTGTGAAAGCCATGCAGGACATTGTGATCCACAAATTACAATTGGTGATGGATTTCCTCTTTTATTGACAAGTTTCGTGAACTTAACTCTTGCTGGAAATAAATTGACAGGTTTGATACCAGAGAGTCTAACAACATTGCCTAATCTTCAACTTCTTGATATTTCTCATAACAATCTGTCGGGAAAAATTCCCAATTTTTCATCCAAGGTTAAGTTATTTACCCAAGGAAATCCTTTGCTTGGCCTAAATATTTCCGGAGATGGTAGAGGTAAAAATGCAACTCATTCCGGAGATGATGTTCCAACAAGAAAAAGTGGAGGTGAAAAGGATTGGCTTAAATATGTTTGGATAGCAGGAGCATCTGTTGGATTTATAATATTTATTGGATTGATTATTTATTATCGTAAGGAGTGTCTTATTTTAGTACAAAGATGGATATTTAGGGGAACAATAAAATCTAGTCATCATATTGTGGAGAATTTTATGGAAAGTTATAAACTGTCAGTGCCGATAAAACAATATAGATATGCAGAAGTGAAAAGAATGACAAACTCATTTCGAGATAAATTAGGTCAAGGAGGATATGGTACTGTGTACAAAGCAAGCTTATCTGATGGTCGTCAAGTGGCTGTGAAAGTAATAAAAGAGTCCAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGCATTAGTAGAACATCACACGTCAATATTGTCTCACTTTTGGGTTTTTGTTATGGAAACAAAAGAGCGTTGATATATGAATTCATGTCCAAAGGGTCACTGGATAATTTCATCCTTAAAAGTGGGTCTTCTGATTCTGTTTGTAGTTTGGATTGGAACACATTATCCAAAATTGCAATGGGCATTGCTCGTGGATTAGAATACTTGCATCAAGGATGTATTTCAAGGATATTGCATCTTGATATCAAACCTCAAAATATTCTTTTGGATGAAGATTTTTGCCCAAAAATATCTGATTTTGGACTAGCTAAAATATGTCAAAGAGATGATAGTGTTGTGTCTATACTTGGTGCACGAGGAACTATAGGATATATAGCTCCAGAAGTATTTAGTCGAACAAATGGCAGAGTTTCTGTCAAATCAGATGTATACAGTTATGGTATGTTAATTTTAGATATGATTGGAAGAAGAAAGAATTCAGGCGCTAGAGATTCATGTACTTCTGAATATTTTCCAGATTGGATTTATAAAGATCTTGAACAAGAAAATAACTCTAAGAATTGTATAGAAAATTCGGAGGAAGAGAATGATATGGTGAGAAAAATTACTATGGTAAGTCTATGGTGCATTCAAACAAAACCATCAGATAGACCTTCAATTAGTAAAGTAATAGAAATGCTACAAGGACCACTTCAGTCGGTTCCATATCCTCCCAAACCTTTTTTATATTCTCCTGAAATTCCAATATTGCAAACTTCATGTGTGCCTTCAAGCAGTTTGTCAGAGACAAAGTCATCAACCTTATCGAAGAATGGTTCCATAAAAACAAATAAGTTCAGCAAAGACAACAATGAAGATGTGATTGTAGTGTAA 2508 0.366 MKILLNQQTVFLSILFFIISIAITNAEYQEADYMSHLIKSLTPTPSTWSNTTHYCKWNGIFCKSNRVVSINLPSSSLSGTLPPHLYALTNLTRIDLHNNSLNGPLANFSGLGALEAIYLGHNNFNTIPNGCFQAIPSLQILNLSNNLNLQQWTFTKNLIDSYFLRVLDLEATNIGESLPSEMFDPYPRLDIVVLSHNNIVGPLPQSLGSSVVRYLRVNNQENQNGFNDTLDVISSMTFLRQAWLNNNFFQGSIPNRFASTNLSDLQLQSNWLIGLVPPSLLALTSLNNISLDDNFFQGPIPVFPKRVKATWKGNPFCESHAGHCDPQITIGDGFPLLLTSFVNLTLAGNKLTGLIPESLTTLPNLQLLDISHNNLSGKIPNFSSKVKLFTQGNPLLGLNISGDGRGKNATHSGDDVPTRKSGGEKDWLKYVWIAGASVGFIIFIGLIIYYRKECLILVQRWIFRGTIKSSHHIVENFMESYKLSVPIKQYRYAEVKRMTNSFRDKLGQGGYGTVYKASLSDGRQVAVKVIKESKGNGEEFINEVASISRTSHVNIVSLLGFCYGNKRALIYEFMSKGSLDNFILKSGSSDSVCSLDWNTLSKIAMGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQRDDSVVSILGARGTIGYIAPEVFSRTNGRVSVKSDVYSYGMLILDMIGRRKNSGARDSCTSEYFPDWIYKDLEQENNSKNCIENSEEENDMVRKITMVSLWCIQTKPSDRPSISKVIEMLQGPLQSVPYPPKPFLYSPEIPILQTSCVPSSSLSETKSSTLSKNGSIKTNKFSKDNNEDVIVV 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03148 835 SMART serkin_6 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03148 835 SUPERFAMILY L domain-like 46 388 - -
Vivi6g03148 835 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Vivi6g03148 835 SMART LRR_typ_2 135 156 IPR003591 -
Vivi6g03148 835 SMART LRR_typ_2 88 110 IPR003591 -
Vivi6g03148 835 SMART LRR_typ_2 111 134 IPR003591 -
Vivi6g03148 835 SMART LRR_typ_2 362 386 IPR003591 -
Vivi6g03148 835 FunFam PR5-like receptor kinase 574 782 - -
Vivi6g03148 835 Pfam Protein kinase domain 504 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03148 835 Gene3D Transferase(Phosphotransferase) domain 1 574 779 - -
Vivi6g03148 835 ProSiteProfiles Protein kinase domain profile. 500 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03148 835 MobiDBLite consensus disorder prediction 401 421 - -
Vivi6g03148 835 PANTHER OSJNBA0070M12.3 PROTEIN 338 775 - -
Vivi6g03148 835 Pfam Leucine rich repeat N-terminal domain 37 62 IPR013210 -
Vivi6g03148 835 Gene3D Ribonuclease Inhibitor 324 399 IPR032675 -
Vivi6g03148 835 ProSiteProfiles Leucine-rich repeat profile. 364 386 IPR001611 GO:0005515
Vivi6g03148 835 Gene3D Ribonuclease Inhibitor 30 323 IPR032675 -
Vivi6g03148 835 SUPERFAMILY Protein kinase-like (PK-like) 480 772 IPR011009 -
Vivi6g03148 835 Pfam Leucine rich repeat 89 146 IPR001611 GO:0005515
Vivi6g03148 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Vivi6g03148 835 Gene3D Phosphorylase Kinase; domain 1 474 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03148 Vivi-Chr6 120689833 120693871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03148 434 806 Receptor kinase-like Gene Family AT1G66910 51.969 1.67e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi6g03148 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03148 - K00924 vvo:131612229 1277.69