Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03139 ATGAGTGAATCTTCAGTGAAGAATTTGGCTATTACAGATAAGGTTCAAAAACCTGGTGGTTGTGTTGGCATTTTCTTTCAACTTATTGATTGGAAGAAGAGACTTGTTAAGAAAAAGCTCTTCTCTAAGAAGCTTCTCACTCCTGCTCGTGCGAAAAAGTTTAGAGGAGATGAAAAAATGCCGAATTCCAAGCTTCACTTGATTGCTAATGAGAATAGTGGAGGTTTCCCGAAAGGGGGGAGTCACGGTGTAGATGTAGAGCAAAAGAGTGAAATGCGGGTTCCGAGTTTGGTGGCGAGGTTGATGGGTCTAGATTCTATTCCGGCTGCTCAGCGAGAGAAGTCGAAGAAAGCTTTGTGTCCTGATTATAGTTGTGGCGATGAGAAGGAGTGTTTGAGTGATCGTTGTGAGTTGGATAGGCAAGGTAAGGATTCGGAAATGAGAGTTGTGAAGCATGATTCGAGACCTCAGAAGCTTCAGAAAACGGGATTGTGCGAGAGAAATGCAGTGACTAGGTTTGGAGCGGAGGCTCTTCATATTAAGAGTGTTTTGTCGCGAGCGAAAAAGTATAACCAAAATCATAATCATCATCATCATCCGAAACTTGCTTCTCCTTTGAAAAGTCCTAGGGTTAGTTCTGGAAAAAGTGCTTCTCGAGGCTCTAGATTGATAGGAGCGGCTGCTAAGATTTTGGAACCTGGACTGCATGCGAGTAGAGGTAAAGGTTCTCTTACGAATCACGCGTCTACATGTCCTCTTAAGGCCGGCATTGGAGCGGATGGTGTTGGAAATAAGTCACCGGTTATGCAAAGTCAATCTTGTTATGCTTCCTGCACAGCCAAACCTTTATCAGGGCAGTCTTCTTGCAAAAATTGTGGCAATTTGCTTGATGTAATTGATTGCACGGTGGAGGTTAGGGGACCACCAGATGTTTCTCCGCCGATTGTTTCTGACGTGGAAATCAATGCTGCCTCTATGGTATCGTCGATTAAGAAGGGAAAGTCTTTTGCTCCCTCTCAAGGACAAGGAAGAGATATCGTTCTTCCGAGAAGTCAGGGAAAGTTCTCATCGTCTGTTTCTGATGAAGAGGGGAAGAATTATGCGCAACGCTCATGGAATGAACCGACTACCATAAGAATTCCAATGCCCCGCGAAGGTCCGGCTAAATGTAGTTCATCATGTCAACCATTAAGGGCTCGAGAGGATGATGCATCTTCTTTCGCCTATAAACACAAAACACAAGAATCAAAATTAAGTAGTGAAGGGTCTTCATCTGGATCAACAACGAGTAGTACGCAAGTAAAAAGAGTATCATCGCACGCGAGCACTGCAAGTGGGACTAAAGACTTTGTTGCTTTGAATAGAAGTGTAAGTGGTCGAACAAGGATGAGATCGCCTACTAAAGTTGATAGTTCCAAATTTAACTTAGAGAAAAAACCTTGTTATAGACAACAGCACGAGTCCCCGTCTCGTGTAAGGACATTGGAGAGGAAAAGAACCCCGAATGTCACACAACTCGAAGGCACGACTCCTGCTAATTCAGTTGGTTTGAAACAGAGAAATCTTCGCCATGATGCAAATGGTGGAAAAAGGAGGGACTTTGGCTCTTCCTCATTGAACAGTCCCAATGTAAAAAATAGAGGTGGTCAACGAGAACCGGTTAAGGTGAGCCCCAATAGGAACAATGATGCAGTTTCATTCACATTTAGTTCCCATTTGAAGCAAAAGACGGGAATGCCTGTGGAGATGGAAGAGACAAACAACAACAATGAGAGGAATAAATACTTCCAAAGACCTCAATCCTTGAAAGTTGATGAGTTAAGTTGTTTTCTAGAACAAAAGTTAAGGGAACTAACTTCTCGAAAAAATGAGTTGGCTACAAATGCTCTACCTCAAAAATCAAGTGCGGTGATTCTTCAGGAGCTGATATCTGCTCTAAGTTCAGAACATTTGATCGGTCATGACGGTCATATGCATAGTGAAGATGTTGGATTCCTTTGTGAAACCAAACAAGAAAGATTGTTAGGAGCCTCTTGCAATGATAATCATCTCAGTCCCGGATCTGTTTTAGAAGCTTCATTTTCTTCTAGTAGTCTCGACGAAAGCTCAGGACGAGGTTTTCACCCTGATTCCGTGAGTTTCTCGTATAGCCAGCCGGAACAAATGGAACATGACGACGAACTTTTAGATTCTGCAGTGTCTTTTAATAAAGGAAGTATAAGCAAGATACTAATTGATATTGTCTACCAAATTTCTATGGCATTGCAATGGTTATATTCTTTCGGGACACATTTCACAAGAAGCAAGCTCAACAATATGAAGAGTGTTCTAATGAATGCTGAATTAGTGCTTCGAATTGCAAATGAAAATAGCGAGGAAGAAATGCCGCAACCACAGCTTCTAATTTCTCGGTTTCTTCATAATGAATTGGATGCTATGTTGACTGATTTTAACGGTTTTGTTGGCTGTGAGGATTCCAATTCCAATTCCAAACCAAGAAAGATGCTCAATGGATTTATCTTGGACTGCGTTATAGAATATCTAGAATCTAATTGTTACCAATATTTTCACTCTGGATTCAACTCATGGACGCAGCTGCCGTTATGCATGAAAGACGTGACATTGACTCAAGAGGTCACGAGAGAGGCAAATAAGTGGGCGTGTATGGTTGGGATGGTACCTGATGAAATAATCGAATGGGAGATGAGTCATTCCCTCGGGAAATGGGATGACTTTGATATCGAAGCATTTGAGGCCGGTGTTGATATAGATGGAGTTATACTTCATAGTTTGGTTGATGAAGTTGTTGAAGAGTTTGTAGGTTGCAAGCATAGTTCTTACTCCTTTTGA 2850 0.4196 MSESSVKNLAITDKVQKPGGCVGIFFQLIDWKKRLVKKKLFSKKLLTPARAKKFRGDEKMPNSKLHLIANENSGGFPKGGSHGVDVEQKSEMRVPSLVARLMGLDSIPAAQREKSKKALCPDYSCGDEKECLSDRCELDRQGKDSEMRVVKHDSRPQKLQKTGLCERNAVTRFGAEALHIKSVLSRAKKYNQNHNHHHHPKLASPLKSPRVSSGKSASRGSRLIGAAAKILEPGLHASRGKGSLTNHASTCPLKAGIGADGVGNKSPVMQSQSCYASCTAKPLSGQSSCKNCGNLLDVIDCTVEVRGPPDVSPPIVSDVEINAASMVSSIKKGKSFAPSQGQGRDIVLPRSQGKFSSSVSDEEGKNYAQRSWNEPTTIRIPMPREGPAKCSSSCQPLRAREDDASSFAYKHKTQESKLSSEGSSSGSTTSSTQVKRVSSHASTASGTKDFVALNRSVSGRTRMRSPTKVDSSKFNLEKKPCYRQQHESPSRVRTLERKRTPNVTQLEGTTPANSVGLKQRNLRHDANGGKRRDFGSSSLNSPNVKNRGGQREPVKVSPNRNNDAVSFTFSSHLKQKTGMPVEMEETNNNNERNKYFQRPQSLKVDELSCFLEQKLRELTSRKNELATNALPQKSSAVILQELISALSSEHLIGHDGHMHSEDVGFLCETKQERLLGASCNDNHLSPGSVLEASFSSSSLDESSGRGFHPDSVSFSYSQPEQMEHDDELLDSAVSFNKGSISKILIDIVYQISMALQWLYSFGTHFTRSKLNNMKSVLMNAELVLRIANENSEEEMPQPQLLISRFLHNELDAMLTDFNGFVGCEDSNSNSKPRKMLNGFILDCVIEYLESNCYQYFHSGFNSWTQLPLCMKDVTLTQEVTREANKWACMVGMVPDEIIEWEMSHSLGKWDDFDIEAFEAGVDIDGVILHSLVDEVVEEFVGCKHSSYSF 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03139 949 MobiDBLite consensus disorder prediction 351 376 - -
Vivi6g03139 949 Pfam Domain of unknown function (DUF4378) 774 934 IPR025486 -
Vivi6g03139 949 MobiDBLite consensus disorder prediction 403 417 - -
Vivi6g03139 949 Pfam DUF761-associated sequence motif 87 112 IPR032795 -
Vivi6g03139 949 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 938 - -
Vivi6g03139 949 MobiDBLite consensus disorder prediction 333 562 - -
Vivi6g03139 949 MobiDBLite consensus disorder prediction 192 220 - -
Vivi6g03139 949 MobiDBLite consensus disorder prediction 471 500 - -
Vivi6g03139 949 MobiDBLite consensus disorder prediction 533 547 - -
Vivi6g03139 949 MobiDBLite consensus disorder prediction 418 470 - -
Vivi6g03139 949 MobiDBLite consensus disorder prediction 501 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03139 Vivi-Chr6 120538329 120543624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03139 1 939 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.769 1.60e-71 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03139 - - aprc:113861902 1157.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03139 6 120538329 120543624 Vivi6g03139 6 120538329 120543624 ECH