Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03104 ATGAAGAGTGCAGCCGAGCCGAAAGTACTTCCTCGGACCTTGCCTGTCTTAGTTGAGGTATCTGATGCAGACTTAGCTGTTTTAAGAGAAGCTGGCCAGAGACTAATGTCGGGGCAGGATGTTTCATGTGTGCGTGCGGTTTCAAAAGCTCGGGATGGCTCTATGACGCGTTTGGCCTCCATTAGAGAAGCGGCGCAGTTATCGAATACAAGAATTGTTTTGGCAAGAGAAGATATGGAATTCAATACACAATCCTCTCGAGAGCCTGTCTCGGCTACGCCTACGGATCATGGAGAACTCTTGCCTGATGTTGAGACATTGAAGAGGAGTACTGATTCTTTTGGGGAAAATGGTTCGAGTTCATTTGCTGGTGCTAGTCACCCTCCAGAACCTGTGGATACTGATCTTATGAGAACGGTTTATATACCGATAGGTCGAAACAAACCCGAAGCTGGATTGTACATGAAGGGTCCTTTCCTTGAAGATCTTTCAATTTGTAATCTGACTAAGAAACCAAGCCTAGCTGTTGTTTCGCCTGCAGAAAGTACTCTTGAAGAATCAAATGACATGGGGAAGTTAGCATCACCAATTTCAGGTGCTCCTGCATCGCAGAATAACATGAATTCTCTACCTCGCCCGGATTCTGAGGAGAACGAATATGTTTGGGATTCTTCTTTGCCTCCAAGTGGAAATGCCAGTCCACATAGTAGTATTGATAGTGCTAGTGTTCTGAGAACAATGAGTATCGCTAATAGTTGTGCGAGTACGTATCGGAGCGATGCATTCACTAGTGATGGCGTGATTAGTGTAGACAAGAATTGTGATAGTATTAAAGGAAGTGTAAGGGGGGATTCACTCGAGAGTGCAAAAACTAGTGCTAGTCGGGCAAGTGATAGCAGCGGCCTCAGTGATGACAGCAACTGGAGTAACATCACTGGTAGTGCCAATAAACCACATAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCTGTTCGAACTCGTGATAGAATTTTGGGCATGAGTCATTTTAAGTTACTAAGACGACTTGGTTGTGGTGATATCGGTAGTGTGTATCTCTCTGAGCTGAGTGCAACTCGGTGTTATTTCGCAATGAAAGTTATGGACAAGGCATCCCTTGCTGCCAGAAAGAAGCTGGTTAGGGCACAGACAGAAAGAGAGATACTGCAGTTGCTCGACCATCCATTTCTGCCAACGTTATACACACATTTTGAGACCGACCGATTCTCATGTTTGGTAATGGAATACTGTCCGGGCGGTGATCTTCATAATTTAAGGCAACGGCAACCAGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTAGCAATTGAATATCTTCACATGCTTGGAGTTGTTTATCGAGACCTTAAACCTGAAAATGTACTTGTTCGAGAAGACGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTTAGGTGTGTTGTTTCACCTACCCTTATCAGAACTCACGACAACGACCCTTCAAAATGGGCAGCTGGTGGTGCATTCTGTGTTCAGCCTGCTTGTATTGAGCCTACATCTGTATGCATCCAGCCTGTCTGTTTTATGCCTAAGCTTTTTTCTAAAAAATCACGGAAGCCTAAAGCAGATACTGGTCTGACAACTAGCGCACTTCCAGAACTTCTTGCCGAGCCAACATCAGCGCGGTCGATGTCATTCGTTGGCACACATGAGTATCTCGCCCCTGAAATAATCAAAGGAGAAGGTCACGGAAGTGCAGTTGATTGGTGGACATTCGGCATTTTCTTACACGAGTTATTGTATGGTAAAACCCCTTTCAAAGGATCTGGAAACCGAGCTACGCTGTTCAATGTAGTAGGGCAGCAGCTCAAGTTTCCCGAGTCGCCAACTACGAGTTACGCCAGCCGGGATCTAATACGAGGTTTGCTTGTGAAGGAGCCGCAGAACCGTCTTGGAGTGAAAAGGGGTGCAACCGAGCTCAAACAGCATCCTTTCTTTGAAGGCATAAACTGGGCGTTGATTAGGTGCAGTACGCCACCGGAAATTCCAAGACCAACGGAAACTGAACTACCGACAAAGTTTGAAGCAGTTGATAATAATACTGTCGGGGTTGGGAGCAATAGTAAGAAAATGGTTGATGGTAATACCGAAACGAAGCCCGGGGGTGGTAAATATCTCGACTTTGAGTTCTTTTAG 2220 0.455 MKSAAEPKVLPRTLPVLVEVSDADLAVLREAGQRLMSGQDVSCVRAVSKARDGSMTRLASIREAAQLSNTRIVLAREDMEFNTQSSREPVSATPTDHGELLPDVETLKRSTDSFGENGSSSFAGASHPPEPVDTDLMRTVYIPIGRNKPEAGLYMKGPFLEDLSICNLTKKPSLAVVSPAESTLEESNDMGKLASPISGAPASQNNMNSLPRPDSEENEYVWDSSLPPSGNASPHSSIDSASVLRTMSIANSCASTYRSDAFTSDGVISVDKNCDSIKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAVRTRDRILGMSHFKLLRRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLVRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHNLRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLIRTHDNDPSKWAAGGAFCVQPACIEPTSVCIQPVCFMPKLFSKKSRKPKADTGLTTSALPELLAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPTTSYASRDLIRGLLVKEPQNRLGVKRGATELKQHPFFEGINWALIRCSTPPEIPRPTETELPTKFEAVDNNTVGVGSNSKKMVDGNTETKPGGGKYLDFEFF 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03104 739 ProSiteProfiles Protein kinase domain profile. 344 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03104 739 Pfam Protein kinase domain 345 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03104 739 Pfam Protein kinase domain 571 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03104 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Vivi6g03104 739 PANTHER FLIPPASE KINASE 1-RELATED 95 697 - -
Vivi6g03104 739 MobiDBLite consensus disorder prediction 182 238 - -
Vivi6g03104 739 Gene3D Phosphorylase Kinase; domain 1 342 427 - -
Vivi6g03104 739 CDD STKc_phototropin_like 342 693 - -
Vivi6g03104 739 SMART serkin_6 344 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03104 739 Gene3D Transferase(Phosphotransferase) domain 1 428 496 - -
Vivi6g03104 739 FunFam serine/threonine-protein kinase D6PK-like 569 692 - -
Vivi6g03104 739 MobiDBLite consensus disorder prediction 281 321 - -
Vivi6g03104 739 SUPERFAMILY Protein kinase-like (PK-like) 326 697 IPR011009 -
Vivi6g03104 739 MobiDBLite consensus disorder prediction 222 238 - -
Vivi6g03104 739 Gene3D Phosphorylase Kinase; domain 1 693 703 - -
Vivi6g03104 739 MobiDBLite consensus disorder prediction 110 131 - -
Vivi6g03104 739 Gene3D Transferase(Phosphotransferase) domain 1 569 692 - -
Vivi6g03104 739 FunFam serine/threonine-protein kinase D6PK-like 428 495 - -
Vivi6g03104 739 FunFam Serine/threonine-protein kinase D6PK-like 342 427 - -
Vivi6g03104 739 MobiDBLite consensus disorder prediction 198 213 - -
Vivi6g03104 739 MobiDBLite consensus disorder prediction 285 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03104 Vivi-Chr6 119267387 119270732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03104 1 739 AGC Kinase Gene Family AT2G44830 62.832 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi6g03104 Pkinase 2.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03104 - - gmx:100800019 1145.18