Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03094 ATGGTAGCTTGTTGGAAGATTCTCTTCATGATCCTTTGGATCCTTTCAACAGTATTTTTTCCTCAACAAGTAGACGGTTTTTCCGAAATCACTTCTTTGACGTCTACTACTGTTAATGATCAAGCTGCCATTGGAGACAGTGAAGCAAATGCTCTGTTAAAGTGGAAAGACAGCTTTGAGAACAACAGCCAAGCTCTCTTGTCAACTTGGACAAAAGCTACTAGTCCATGCAAATGGGAAGGAATTGGTTGTGACAAATCAAAATCCATCATTAGCATAAATCTTGCAAATTATGGACTCAAAGGTAAACTCCAAACTTTTAGCTTCTCTTCATTCCCGAAACTTCTCGGGCTAAATATATATAATAACTCCTTTTATGGAACCATTCCTCCACAAATTGGTAACATGTCCAAAATAAATGTTCTGAACTTTTCTAATAACCCACTAGAAGGTTCCATCCCCAAAGAAGTGTGGACATTGAGGAGTTTAAAAGGCCTTGACTTTTCTGTATGTCTGCTAAGTGGAGAAATTTCGACTTCCATAACAAACTTGACTAACCTATCCTATCTAGATTTCATGGACAACGAATTTTCTAGCGGCTATATTCCCCGTGAGATCGGAAAACTGAACCAGTTGGAGTATCTATCTATTTCAGGTTGTAACCGTATTGGTTCCATTCCTCAAGAAATTGGAATGTTGACAAAACTCGGTGTTATGGATTTGTCAGATAACACTCTATCTGGTACCATTCCAGAAACAATTGGTAACATGACCAGTTTAAATAAACTTTACCTTTCTAATAACACATTGTTGTCTGGAACAATCCCACTCTCCTTGTGGAACATGTCTTACTTGTCTGTGCTCTATCTCAGTAGCAATAAACTTTCTGAATCAATCCCTTCTTCTGTACAAAACTTGGTCAACTTGAACGAACTTTCACTTCATTCTAACAACTTTTTTGGACCGATTCCTTCCTCAATCGGAAACTTGACAAAGATGAGAATATTATACTTGTTCACTAATCAGTTTTCTGGATCGATTCCCGCTTCTATTGGAAAAATGGTCAATATGTTGGTCCTCAGTTTGTATGAAAACGATCTTTCTGGAACTATTCCTGCTACAATTGGAAATTTGACAGGCTTAAAAGCCTTCGAATTGGCCACCAATAAACTTCATGGTAGCATTCCACTAAGCCTATATAACTTTACCGACTGGGGTTCCTTTACATTGGCCGAGAATGATCTCGTTGGCCATTTGCCATCTCAAGTATGTTCTGGTGGATTTCTTCTATACTTCAGTGCTTTTCGCAACCATTTCACCGGTCCAGTACCAACAAGCTTGAAAAACTGTTCTAGTATTGAAAGAATTAGGCTTCAGGGTAATCAAATAGAAGGTGATATAGCCCGAGATTTTGGTGTATATCCAAATTTGAAACTTATTGATCTGAGTGACAATAAATTTAATGGTCATATTTCACCAAACTGGGGAAAGTGTCCTAATCTTAATACCTTCAGGATCTCCAACAATAATATCTCTGGTGGCATACCGTTAACACTTCTTGAGGCAAACAAACTAGGCGAGCTTGACCTTTCTTCAAATCACTTAACAGGAAAGCTTCCAAAGGAACTTGGATACCTGAAATCATTACTTGAAGTTAAGATCAGCAACAATCATCTTTCAGGAAATATTCCAAGTGAAATTGGATTGCTAGAGAATCTCGTCGATTTCAATGTAGGGGGAAACATGTTGAGTGGCACAATACCAAAAGAAGTTGTCAAGTTACCCTTGTTACGTAACTTGAATTTGAGCACGAACAAAATTGAAGGGAGAATTCCCTCAGAGTTTGGCCTGTCACAGCCTCTTGAATCTCTTGATCTTAGCGGGAATTTGCTGAGTGGAACAATACCACCAGTTCTTGGAGGGTTGAAGCAACTGCAAAAGCTGAATCTGTCATGCAATAATCTTTCTGGCAACATTCCATCAAGTTTTGAAAATTCCATGTCAAGCTTGACTTATGTCAACATATCAAACAACCACTTAGAAGGGAGGTTGCCGAATAATGAAGCCTTTCTCAAGGCTCCAATTGAATCATTGAAAAACAACAAAGGCTTGTGTGGTAATCACACTGGCTTAATGCTTTGCCCAACCAACCACAATCAAAAGAGACACAAGATCATCCTGCTTATATTGTATATTATCTTAGGTGCTCTGCTACTAGTATTTTGTGGGGTGGGAATTTCGATGTATATTCTTTATCGAAAAGCAAGAAAGACAAAAACCAAAGATAAAGATCCTAATGAAGCACAAGCAGATGAAGTCTTTTCCATATGGAGTCATGATGGAAAAATGATGTTTGAAAATATCATTGAAGCTACGAATAATTTTGATGACGATTTTCTCATTGGAGTGGGAGGAGAAGGATCTGTTTACAAGGCTAAGCTGTCTGCAGATATGGTTGTTGCAGTAAAGAAACTTCATTCGCGAACAAATGAGGAGAGGCCCAATTCCAAAGGCTTCGAAAATGAAATTCAAGCTTTGACAGAAATCAGGCATCGTAACATCATAAAGCTTTATGGATATTGTCAACATTCAAGATTCTCATTTTTGGTTTATAAGTTCTTGGAAGGTGGAACATTGACTCAAATGCTAAACAATGACACAAAAGCCACTGCATTTGATTGGGAAAAGAGGGTGAATGTTGCTAGAGGTGTGGCTAATGCTTTGTCCTATATGCATCACGACTGCATACCTCCGATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTTTGGATTCATCATATGAAGCTCAACTTTCTGATTTTGGAACATCCAAATTTCTAAAGCCTGATTCAAGCAGCTGGACCACATTTGCAGGCACCTTCGGGTATGCAGCTCCAGAGTTTGCCCAAACAATGGAAGTGACTGAGAAGTGCGACGTATACAGCTTTGGAGTTCTTTGTTTTGAAATCCTTCTAGGAAAGCATCCAGCGGATTTCATTTCTTCGTTGTTCTCATCGTCCACAGCAGCAATGACTTATAATTTGTTGTTGATTGATGTGTTAGACAACCGCCCTCCTCAACCTACCAAATCAATTGTTGGGGATGTCATCTTGATTACAAGATTGGCATTCTCTTGCTTGAGTGAAAATCCATCTTCTCGACCCACCATGGATTATGTTTCTAAAGAGCTAATGATGAGAAAACCACAGTCACATTTAGTGGACCAATTTCCCCATATCAGACTTGGACAACTCCACTAA 3264 0.3873 MVACWKILFMILWILSTVFFPQQVDGFSEITSLTSTTVNDQAAIGDSEANALLKWKDSFENNSQALLSTWTKATSPCKWEGIGCDKSKSIISINLANYGLKGKLQTFSFSSFPKLLGLNIYNNSFYGTIPPQIGNMSKINVLNFSNNPLEGSIPKEVWTLRSLKGLDFSVCLLSGEISTSITNLTNLSYLDFMDNEFSSGYIPREIGKLNQLEYLSISGCNRIGSIPQEIGMLTKLGVMDLSDNTLSGTIPETIGNMTSLNKLYLSNNTLLSGTIPLSLWNMSYLSVLYLSSNKLSESIPSSVQNLVNLNELSLHSNNFFGPIPSSIGNLTKMRILYLFTNQFSGSIPASIGKMVNMLVLSLYENDLSGTIPATIGNLTGLKAFELATNKLHGSIPLSLYNFTDWGSFTLAENDLVGHLPSQVCSGGFLLYFSAFRNHFTGPVPTSLKNCSSIERIRLQGNQIEGDIARDFGVYPNLKLIDLSDNKFNGHISPNWGKCPNLNTFRISNNNISGGIPLTLLEANKLGELDLSSNHLTGKLPKELGYLKSLLEVKISNNHLSGNIPSEIGLLENLVDFNVGGNMLSGTIPKEVVKLPLLRNLNLSTNKIEGRIPSEFGLSQPLESLDLSGNLLSGTIPPVLGGLKQLQKLNLSCNNLSGNIPSSFENSMSSLTYVNISNNHLEGRLPNNEAFLKAPIESLKNNKGLCGNHTGLMLCPTNHNQKRHKIILLILYIILGALLLVFCGVGISMYILYRKARKTKTKDKDPNEAQADEVFSIWSHDGKMMFENIIEATNNFDDDFLIGVGGEGSVYKAKLSADMVVAVKKLHSRTNEERPNSKGFENEIQALTEIRHRNIIKLYGYCQHSRFSFLVYKFLEGGTLTQMLNNDTKATAFDWEKRVNVARGVANALSYMHHDCIPPIVHRDISSKNVLLDSSYEAQLSDFGTSKFLKPDSSSWTTFAGTFGYAAPEFAQTMEVTEKCDVYSFGVLCFEILLGKHPADFISSLFSSSTAAMTYNLLLIDVLDNRPPQPTKSIVGDVILITRLAFSCLSENPSSRPTMDYVSKELMMRKPQSHLVDQFPHIRLGQLH 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03094 1087 SUPERFAMILY RNI-like 323 682 - -
Vivi6g03094 1087 FunFam Leucine-rich receptor-like protein kinase family protein 202 300 - -
Vivi6g03094 1087 Gene3D Ribonuclease Inhibitor 300 405 IPR032675 -
Vivi6g03094 1087 Gene3D Ribonuclease Inhibitor 45 200 IPR032675 -
Vivi6g03094 1087 Gene3D Ribonuclease Inhibitor 201 299 IPR032675 -
Vivi6g03094 1087 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 403 718 - -
Vivi6g03094 1087 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 331 1067 - -
Vivi6g03094 1087 SUPERFAMILY Protein kinase-like (PK-like) 779 1067 IPR011009 -
Vivi6g03094 1087 ProSitePatterns Tyrosine protein kinases specific active-site signature. 919 931 IPR008266 GO:0004672|GO:0006468
Vivi6g03094 1087 Pfam Leucine rich repeat 220 270 IPR001611 GO:0005515
Vivi6g03094 1087 Pfam Leucine rich repeat 621 680 IPR001611 GO:0005515
Vivi6g03094 1087 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 757 873 - -
Vivi6g03094 1087 ProSiteProfiles Protein kinase domain profile. 795 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03094 1087 FunFam MDIS1-interacting receptor like kinase 2 874 1071 - -
Vivi6g03094 1087 SUPERFAMILY L domain-like 74 414 - -
Vivi6g03094 1087 Pfam Protein kinase domain 800 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03094 1087 Gene3D Ribonuclease Inhibitor 406 716 IPR032675 -
Vivi6g03094 1087 Gene3D Transferase(Phosphotransferase) domain 1 874 1078 - -
Vivi6g03094 1087 FunFam Leucine-rich receptor-like protein kinase family protein 301 397 - -
Vivi6g03094 1087 SMART LRR_typ_2 594 617 IPR003591 -
Vivi6g03094 1087 SMART LRR_typ_2 642 665 IPR003591 -
Vivi6g03094 1087 SMART LRR_typ_2 354 378 IPR003591 -
Vivi6g03094 1087 SMART LRR_typ_2 282 305 IPR003591 -
Vivi6g03094 1087 SMART LRR_typ_2 306 330 IPR003591 -
Vivi6g03094 1087 SMART LRR_typ_2 667 692 IPR003591 -
Vivi6g03094 1087 SMART LRR_typ_2 546 570 IPR003591 -
Vivi6g03094 1087 SMART LRR_typ_2 233 257 IPR003591 -
Vivi6g03094 1087 Pfam Leucine rich repeat N-terminal domain 46 85 IPR013210 -
Vivi6g03094 1087 FunFam Nuclear pore complex protein NUP107 45 199 - -
Vivi6g03094 1087 Gene3D Phosphorylase Kinase; domain 1 754 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03094 Vivi-Chr6 119028936 119032801 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03094 48 967 Receptor kinase-like Gene Family AT4G08850 43.408 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi6g03094 Pkinase 9.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03094 - - gmx:100815688 1453.73