Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03090 ATGAGTCACTCCATTTTATCTCTTCTTTTTTCATATCTTGTTATTTTCACTTTGTCATTGAATCATGTTCATGCCAACAAAAAGTGTTACATTGTATACTTGGGAGCACATTCTCATGGTCCAACTCCTTCCTCTGCTGACCTTCAAATTGCTACATCTTCTCATTATGATTTACTAGCTTCAATCTTGGGAAGTGAGCAGAATGCAAAAGAAGCAATTATTTATTCATATAATAAACAGATCAATGGGTTTGCAGCTATGCTTCAAGAGGAAGAAGCTGCACAAATTGCAAAAAATGGAAAGGTGGTATCAGTGTTCTTGAGTAAAGAGCATAAACTGCACACTACACGTTCATGGGAATTTCTTGGATTGCGCGGAAACGATATGAACTCAGCTTGGCAAAAGGGAAGGTTTGGTGAAAACACAATCATAGCTAACATTGATTCAGGTGTTTGGCCCGAATCGATGAGTTTTAGTGACAGAGGAATAGGCCCAATTCCAGCAAAATGGCGTGGGGGTAATATATGTCAAATTAACAAACTCAAAGGCTCTAACAAAGTTCCATGTAACAGGAAGCTAATTGGAGCAAGATTTTTCAACAAAGCATACGAATCATTCAACGGAAAACTCCCTCGTTTGCAACATACAGCGCGCGACTTTGTAGGCCACGGAACACACACATTATCAACGGCAGGTGGAAACTTCGTACCTGGTGCAAGTATATTTAATATTGGCAACGGAACGGTAAAAGGTGGTTCTCCAAAATCAAGAGTTGCAACCTACAAAGTGTGTTGGTCTTTAACAGATGCTACTAGTTGTTTTGGTGCGGATGTATTAGCTGCTATTGATCAAGCAATTAGTGACGGTGTTGATTTGATTTCTGTTTCTGCTGGTGGAAGTACTAGTACAAATTCTGAAGAAATTTTTACAGATGAGGTTTCAATAGGTGCATTTCATGCACTTGCTAGAAATATATTGTTAGTCGCTTCTGCGGGAAATGACGGACCTACCGCTGGAAGTGTTGTTAATGTTGCCCCTTGGGTGTTCACTGTTGCTGCTAGTACATTGGATAGAGATTTCATCAGTTCTATTACCATTGGTAACAAAACAATCACGGGAGCCAGTCTTTTTGTAAACTTGCCACCTAACAAGTCTTTCACCGTAGTGACTTCTACTGATGCGAAATTGGCAAATGCGACAGATCGAGATGCGCAATTTTGTAGGCCAGGAACACTTGATCCTTCAAAAGTGAAGGGTAAAATAGTGGAATGTGTTAGAGAAGGGAAAATAAAATCAGTTGCTGAGGGTCAAGAAGCTTTATCTGCAGGTGCTAAGGGAGTCATTTTGAGAAATCAACCGCAAATTCATGGAAGAACACTTCTTTCTGAGCCTCATGTTTTGTCTACTATCAGCGCTACTGCCCCTAAGACGAACTCAACACCAAATAGTGCAGATCTAATTCCCACGGATATTAAGTCGGGTACTAAAATAAGAATGTCAAAAGCAAAAACAAAATATGGAAGAAAGCCAGCTCCAGTTATGGCTTCATACTCATCTAGAGGACCAAATAGAGTTCAACCGTCAATACTCAAGCCTGATGTAACTGCGCCGGGTGTGAACATACTTGCTGCCTATTCATCGTTTGCAACTGCGTCTAACTTAATAACAGACACTCGTCGGGGTTTTCCATTCAATGTCATGCAAGGAACATCTATGTCTTGTCCTCATGTTGCTGGCACTGCTGGATTAATCAAAACACTTCATCCTAATTGGAGTCCAGCAGCTATTAAATCAGCTATCATGACCACCGCAAGTACAAGAGATAACACCAACAAGCCAATCCGTGACGCATTTGATAAAAAATTGGCAAATCCATTTGCATATGGTTCAGGACACATTCAACCCAACAGTGCAATAGATCCAGGACTTGTTTATGATCTAACCATTGTTGATTACTTAAACTTCTTATGTGCTTCTGGATACAACAAACAACTCATTTCATCACTTAATTTCAATAGGAAATTTACTTGTTCAGGATCACATAGCATAACAGACTTGAATTATCCTTCAATCACATTACCAAATCTTGGATTAAATGTCCTTAACGTCACACGGACAGTCACCAATGTTGGACCTCCTAGTACATATTTTGCAAAAGCTAAGTTGTCCGGATATAAAATTTTTGTTGTACCGAGTTTCTTGAAGTTCAAGAAAACCGGTGAAAAGAAGACATTTAGAGTTTCTGTGAAGGCAACAAAGGCGACTCGTAGGAGAAAATATCAATTTGGTGAATTGAAATGGACAAATGGAAAACACATTGTAAGGAGTCCTATTACTGTTCGACGTAAATGA 2352 0.395 MSHSILSLLFSYLVIFTLSLNHVHANKKCYIVYLGAHSHGPTPSSADLQIATSSHYDLLASILGSEQNAKEAIIYSYNKQINGFAAMLQEEEAAQIAKNGKVVSVFLSKEHKLHTTRSWEFLGLRGNDMNSAWQKGRFGENTIIANIDSGVWPESMSFSDRGIGPIPAKWRGGNICQINKLKGSNKVPCNRKLIGARFFNKAYESFNGKLPRLQHTARDFVGHGTHTLSTAGGNFVPGASIFNIGNGTVKGGSPKSRVATYKVCWSLTDATSCFGADVLAAIDQAISDGVDLISVSAGGSTSTNSEEIFTDEVSIGAFHALARNILLVASAGNDGPTAGSVVNVAPWVFTVAASTLDRDFISSITIGNKTITGASLFVNLPPNKSFTVVTSTDAKLANATDRDAQFCRPGTLDPSKVKGKIVECVREGKIKSVAEGQEALSAGAKGVILRNQPQIHGRTLLSEPHVLSTISATAPKTNSTPNSADLIPTDIKSGTKIRMSKAKTKYGRKPAPVMASYSSRGPNRVQPSILKPDVTAPGVNILAAYSSFATASNLITDTRRGFPFNVMQGTSMSCPHVAGTAGLIKTLHPNWSPAAIKSAIMTTASTRDNTNKPIRDAFDKKLANPFAYGSGHIQPNSAIDPGLVYDLTIVDYLNFLCASGYNKQLISSLNFNRKFTCSGSHSITDLNYPSITLPNLGLNVLNVTRTVTNVGPPSTYFAKAKLSGYKIFVVPSFLKFKKTGEKKTFRVSVKATKATRRRKYQFGELKWTNGKHIVRSPITVRRK 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03090 783 Gene3D Peptidase S8/S53 domain 142 652 IPR036852 GO:0004252|GO:0006508
Vivi6g03090 783 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vivi6g03090 783 PRINTS Subtilisin serine protease family (S8) signature 568 584 IPR015500 -
Vivi6g03090 783 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Vivi6g03090 783 Gene3D - 357 506 - -
Vivi6g03090 783 CDD PA_subtilisin_like 363 470 - -
Vivi6g03090 783 Pfam Peptidase inhibitor I9 30 114 IPR010259 -
Vivi6g03090 783 Pfam Subtilase family 139 611 IPR000209 GO:0006508|GO:0008236
Vivi6g03090 783 Gene3D - 656 782 - -
Vivi6g03090 783 SUPERFAMILY Subtilisin-like 113 643 IPR036852 GO:0004252|GO:0006508
Vivi6g03090 783 Pfam Fibronectin type-III domain 685 780 IPR041469 -
Vivi6g03090 783 Pfam PA domain 400 468 IPR003137 -
Vivi6g03090 783 ProSiteProfiles Serine proteases, subtilase domain profile. 118 639 - -
Vivi6g03090 783 MobiDBLite consensus disorder prediction 500 530 - -
Vivi6g03090 783 FunFam Subtilisin-like protease SBT5.3 18 114 - -
Vivi6g03090 783 CDD Peptidases_S8_3 111 605 IPR034197 -
Vivi6g03090 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 114 IPR037045 -
Vivi6g03090 783 FunFam Subtilisin-like protease SBT1.5 141 367 - -
Vivi6g03090 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 780 IPR045051 -
Vivi6g03090 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 569 579 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03090 Vivi-Chr6 118923710 118927479 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03090 17 781 Subtilisin-like Serine Gene Family AT5G59810 51.036 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03090 - - gmx:100803751 1234.94