Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03065 ATGACGGATCAGCCAGTGACTAGAGCAAATCTTGAGAGAATTACCACGACTTTTACCGCGACTCTAACGTCTTTGACTGAACAAAAGACAACTTTTACAAATCAGGTTGTGTTGCTAATGGATGAGATTTTGTCTTCCACAAATGTCACTCAAGATGTTGGTTCAATCTCCGATGAAAATAAAGAATCGTGGCAACATTTTGTCTTCCACGACCTTTCATCAATCAAGGATTTCTACGCTAAATACGCTCATGAAAAGGGATTTTCTTTGAGAAGAAATTTGCACTCCTTCTATGATTCTCGTAACAAAAAAATGGACATTGTGCAATATGTCTGTTATGTTTGTAACAAGCATGGGAGTCGGGCGGATCCTAAGAACAAGACAAACTCGGATACTCCTGTTCTCATTGAATACCATAAAGAGAAAGAACTTCCCGAGGAAAGGACTGGTTGCCTAGCTAGTATTTCGTTGAAGTATGATTCTAATGTTAAAGGTTATCACATATACAAATGGAATGTTACTCATAACCACCCTCTCCATAAACCCGAGCATTCGCATTACTTGAGATCGGCTCGAGAGATTAGTGAGCCTCAAAAACAACTTGCTATAATAAATTCGAAATCAGGCATGTCTGTAAGATCCTCCTTTCAAGTTATGCGTCAAATAGCTGGTGGTTCAAAGAACCTTGGGTATTGCTTCCAAGATTTAAAGAACTTTTGTCACCACTGTTCGACAAAAGGAAATGGTATTGGTGATGCAACTATTATCCATGAATATCTTAGAAATGAAGCTTTGAGGAACCCATCGTTCTATTATGATATCCAAGTAGATTCTGAAGAGAACATAGCTAGCATTTTCTGGTCAGATGCAATCATGCAGCAAGACTATGAATCATTTGGTGATCTCATCAGTTTCAACACAACTTATCGAACAAACACGGAGTATCGTCCATTAGGTTTGTGTTCTATTCATTTCACTACTATTATATCAAGCTTCCATTTTATTTTGCAATTATCAGTGCATTGA 1026 0.3782 MTDQPVTRANLERITTTFTATLTSLTEQKTTFTNQVVLLMDEILSSTNVTQDVGSISDENKESWQHFVFHDLSSIKDFYAKYAHEKGFSLRRNLHSFYDSRNKKMDIVQYVCYVCNKHGSRADPKNKTNSDTPVLIEYHKEKELPEERTGCLASISLKYDSNVKGYHIYKWNVTHNHPLHKPEHSHYLRSAREISEPQKQLAIINSKSGMSVRSSFQVMRQIAGGSKNLGYCFQDLKNFCHHCSTKGNGIGDATIIHEYLRNEALRNPSFYYDIQVDSEENIASIFWSDAIMQQDYESFGDLISFNTTYRTNTEYRPLGLCSIHFTTIISSFHFILQLSVH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03065 341 PANTHER OS01G0519700 PROTEIN 55 310 - -
Vivi6g03065 341 Pfam FAR1 DNA-binding domain 77 180 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03065 Vivi-Chr6 118365084 118370417 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi6g03065 FAR1 4.2e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03065 - - vvo:131614505 697.197