Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03060 ATGAACTATTTGACAGCGTGTTTTCGGCCACGTTTGGATCGATATACACACGGTGGTTCAGATGCTGGTGGTAAACAGGAGGGACTCTTGTGGTACAAAGATTCGGGGAAACATTTGAATGGTGAGTTTTCAATGGCTGTGGTTCAAGCCAACAACTTATTGGAGGATCAGAGCTATATTGAATCGGGTAGTTTGAGTTCCGGTGATTCTGGACCGTATGGTACGTTTGTTGGTGTTTATGACGGGCATGGAGGGCCTGAGACATCAAGGTTTATCAATGATCACCTAGTTAGTCATCTCAAAAGGTTTACTGCAGAGCAACAATCAATGTCAGTGGATGTAATTCGCAAGGCAATCCAAGCAACAGAAGACGGATTTGTGTCTCTTGTGACCAAACAGTGGTCCATGAAACCGCAAATTGCATCGGTTGGATCCTGCTGTCTTGTCGGTGTAATTTGTAATGGAGCTCTTTATATAGCAAATCTCGGTGATTCCCGAGCTGTTTTGGGAAGAGCAGTCAAAGCAACCGGGGAGGTTTTAGCCGTGCAATTGTCCACAGAACACAATGCAGCTATAGAGTCAGTAAGACATGAACTGCAATCTATGCACCCTGGCGATTCAAACATTGTTGTTTTGAGGCATAACGTATGGCGTGTCAAGGGCCTAATACAAATATCTAGATCTATTGGCGATGTGTACCTGAAAAAGGCCGAGTTCAATAGAGAGCCTCTGTATGCAAAGTTTCGGCTTCGTGAGCCGTTCAAGATGCCAATATTGAGCTCAGAACCATCGATATCAGTTCACCAGTTGCAGCCACAAGATCAGTTTATTATATTTGCATCTGACGGCCTCTGGGAGCATCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAATAATCCTCTCTCGGGAATTGCAAGGAGACTAGTGAAAACTGCACTTCACGAAGCGGCGAAAAAGAGAGAAATGAGATATTCAGACTTAAAAGATATTGACCGAGGGGTTCGTAGGCATTTCCACGACGATATCACCGTGATTGTCGTGTTTATTGACTCAAATCTCGTGAGTAGGGCAAGCAATGTTAAGTTCCCTACTATTTCCGTTCGAGGGGGCGGTATGAACTTGCGTCCTAACTAA 1137 0.4424 MNYLTACFRPRLDRYTHGGSDAGGKQEGLLWYKDSGKHLNGEFSMAVVQANNLLEDQSYIESGSLSSGDSGPYGTFVGVYDGHGGPETSRFINDHLVSHLKRFTAEQQSMSVDVIRKAIQATEDGFVSLVTKQWSMKPQIASVGSCCLVGVICNGALYIANLGDSRAVLGRAVKATGEVLAVQLSTEHNAAIESVRHELQSMHPGDSNIVVLRHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKMPILSSEPSISVHQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNNPLSGIARRLVKTALHEAAKKREMRYSDLKDIDRGVRRHFHDDITVIVVFIDSNLVSRASNVKFPTISVRGGGMNLRPN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03060 378 PANTHER PROTEIN PHOSPHATASE 35 348 IPR015655 GO:0004722|GO:0006470
Vivi6g03060 378 SUPERFAMILY PP2C-like 51 351 IPR036457 -
Vivi6g03060 378 Pfam Protein phosphatase 2C 72 319 IPR001932 -
Vivi6g03060 378 FunFam Phosphatase 2C family protein 31 360 - -
Vivi6g03060 378 Gene3D - 31 362 IPR036457 -
Vivi6g03060 378 CDD PP2Cc 43 350 IPR001932 -
Vivi6g03060 378 SMART PP2C_4 34 348 IPR001932 -
Vivi6g03060 378 ProSiteProfiles PPM-type phosphatase domain profile. 42 350 IPR001932 -
Vivi6g03060 378 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03060 Vivi-Chr6 118233005 118236033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03060 1 378 PP2C-type Phosphatase Gene Family AT4G38520 73.545 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03060 - K01102 jre:109006616 652.514