Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03046 ATGCAATCCTTGTACTTGTTTATCTTGTTTATGTTCTTGTTCTTCTCCTCAGAAGCATCACTAGCTTCAATCAAATCAAATAATAGAAGGATCCTTCATGAACCCTTTATACCGTTAAACTCTCTCCCTCCATCAGAACTACCTAAACCATCACCGCCACCATCACCACCACCGTCACTTCATTCTCCACCCTCAACCCCAAACACCAAACACCCATTTTCCACCACCGGTCCCACCACAGTTCCCACGGACAACAACAACCCAAACCAAAACCAATACCAAAATGAATCACCGTTTTTCCCAAACTACCCTCTCTCACCACCACCACCTTCACCACTCACCTTTGCTTCATTCCCAGCTAACATCTCTGCCCTAATTCTCCCTCACACCCCTCAACCAGCTTCCTCTTCTAACAAACTCATCCCCATAGCACTCTCCGCTACTGCCATAGCCGCCGTCGCTGTTTTCATTTTCGGTTTCGTTTACTTCCGGCGACGCCGATATAACCGTCGTGCTTCCACCGAAAGCAAGACTCTAAGATCCGACAGTAGCCTCGAACTTTTCCCGCGTAATGTGGAGACCGCCGTCGATGTAAACCCCTCCGAGTTTCTCTACCTTGGTACAGTAGTAAATTCGCGACAAATTGACGTTGCTCCTCCTCGCGGTGGCGCTTCGGTTTCTCGAAAACTCGAGTCGCCTGAGCTCCGTCCTCTTCCGCCGTTAGCACGACTGCCGGAACCTCCACTACCACCACATCGTGACAACACTTATTCAGATGAAGAAGACGAAGAGTTTTACTCGCCGAGAGGCTCCTCTCTTGGTTGCCTAGAAAGCTCAGGTGGCACAGGATCGGGTTCCCGGCGAGCATTCTCCTCCATAGCCGCTGGAAGAGGCGGCGAATCTAGTTCAATTTCATGTTCTTCCTCTTCTTTCGGTTCTCCGGCACAGTCTCATTCGATTAGCCTCTCACCGCCGGCGAGTTCTAGTCCCAGGAGAACACAACAAAAATCACCTGAAACTACACCAATTCAGAACCAACATGTGCAATATCATCCTTCTTCTTCATCGTCATTCTCTTCATCACGTTCAACACCAGAGAGAGATTTCGATGGAGAAAAAGAAAATGCTTCTTTACCCTCAAATGCACATGCATCATCATCATCATCAGTGTCATTACAAGAGAGATTCATGGAGAAAACTGAAAACGCTTCTTTACCAGAACAACAACCAAGGTTATCCAATCATTCTAGTGCTTCATCTTCAGCTTTTTCTCTTCCTTCTTCACCGGAGAAAATGACAATGATGCATCAAGGTTTTGATCAGTCTCCACGAATGTCGAGTGTCTCCGACGGGTTAAAGCTACCCGGTCTGTCATCATTGCCATTGTCACCCGCCCTACTTTCATCGCCTGAAACAGAAAGAGGAGGGTTTAGCTGCAATCCAAATCAATGGGGAACATTTTCTTATGCTATGCATGCGCCACAGAGGAAACATTGGGAGGTACCGGTTCTCCCAAAGCCTATAGCTCCTCCACCGCCTCCTCCTCTGCCACGGCAGAGGAGGCATTGGGAAATGTCAGCAACCTCGGCTATTGTTGATCAGCCTCGATCGATTTTGAAGCCGCCTGTGTTAGTACCCCCTTCGAGGCCTTTTGTGTTGCAAAACCAAACAACAAACGAGTCTTTGGGGGAAATTGAAGAGAGTTCGAAACTTAAATTGAAGCCATTGCATTGGGACAAAGTGAGAACAAGTTCTGATCGCGAAATGGCGTGGGATCAGATGAATTCCATGTCGTTCAAATTGAATGAGGAAATGATTGAGACATTGTTTGTAGTGAACACATCAAACCAAAAGCCGAAGGATGCTACTCCGCGTTCTGTTCTTCCCTTGCCAAATCAGGAAGGCAGAGTACTTGATCCGAAGAAGTCTCAAAATATTGCAATCTTACTCAAGGCTCTTAATGTCACAATAGAAGAAGTGTGTGAAGCACTTTTAGATGGTAGTAGTGATACAGTTGGAGCAGAGCTACTTGAAAGTTTGTTAAAAATGGCACCAACCAAGGAAGAAGAACGTAAATTGAAGGAGCATAAAGATGACTCACCGACCAAGCTTGATGTGGCTGAGAACTTCTTGAAGGCGATGCTTGATATACCTTTTGCATTTAAAAGGGTTGAAGCAATGCTTTACATGATCAACTTTCAATCTGAAATAGAGTATCTTAGAAAATCATTTCAAACTCTAGAGGTTGCCTGTGAAGAGTTGAGACATTGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTACTTAAAACTGGGAACCGAATGAATGTGGGAACAAATCGTGGTGACGCAGAGGCCTACAAACTCGATACACTTCTCAAGTTGGCTGATGTCAAAGGTGCAGACGGGAAAACCACTCTACTTCATTTTGTCGTACAGGAAATTATTAGAACCGAAGGCGCTCGTCTCTCTTCTACTAACCAAACTACAAATCCTACTCTGATCGAAGATGTTAAGTGCAGGAGACTTGGCCTACAAGTTGTTTCCAATCTGAGTTCAGAGCTATCAAATGTAAAAAGGGCTGCTACTATGGATTCTGAACTTCTCAGCAGTGATGTCTCTAAACTTTCCAAAGGAGCTACAAACATAGCTGAGATTGTGCAATTAATCGAAAAGGCAGGATTGGATGAAACCAGTCGGAAATTTACAGAATCGATGAACAATTTCGTTAGAATGGCTGAGGAGGAAATCATGAAACTTCAAGCGCAAGAAAGTGTCTCTTTGACCCTTGTGAAGGAGGTTACAGAATATTTCCATGGGAACTTATCAAAGGAAGAAGCTCATCCGTTAAGAATCTTCTTGGTTGTAAGAGATTTTATAGCAGTTCTTGACCGTGTCTGCAAAGAAGTCGGTATGATAAACGAACGAACTATGGTTAGTTCGGCTCATAAATTTCCTGTTCCGGTTAACCCAATGCTTCCGCAACCTCTTCCTGGATTACATGAAAGGAAACATTGTAGTAACTCTTCAGATGATGAAAGTACATCATCACCTTAG 3054 0.4473 MQSLYLFILFMFLFFSSEASLASIKSNNRRILHEPFIPLNSLPPSELPKPSPPPSPPPSLHSPPSTPNTKHPFSTTGPTTVPTDNNNPNQNQYQNESPFFPNYPLSPPPPSPLTFASFPANISALILPHTPQPASSSNKLIPIALSATAIAAVAVFIFGFVYFRRRRYNRRASTESKTLRSDSSLELFPRNVETAVDVNPSEFLYLGTVVNSRQIDVAPPRGGASVSRKLESPELRPLPPLARLPEPPLPPHRDNTYSDEEDEEFYSPRGSSLGCLESSGGTGSGSRRAFSSIAAGRGGESSSISCSSSSFGSPAQSHSISLSPPASSSPRRTQQKSPETTPIQNQHVQYHPSSSSSFSSSRSTPERDFDGEKENASLPSNAHASSSSSVSLQERFMEKTENASLPEQQPRLSNHSSASSSAFSLPSSPEKMTMMHQGFDQSPRMSSVSDGLKLPGLSSLPLSPALLSSPETERGGFSCNPNQWGTFSYAMHAPQRKHWEVPVLPKPIAPPPPPPLPRQRRHWEMSATSAIVDQPRSILKPPVLVPPSRPFVLQNQTTNESLGEIEESSKLKLKPLHWDKVRTSSDREMAWDQMNSMSFKLNEEMIETLFVVNTSNQKPKDATPRSVLPLPNQEGRVLDPKKSQNIAILLKALNVTIEEVCEALLDGSSDTVGAELLESLLKMAPTKEEERKLKEHKDDSPTKLDVAENFLKAMLDIPFAFKRVEAMLYMINFQSEIEYLRKSFQTLEVACEELRHCRMFLKLLEAVLKTGNRMNVGTNRGDAEAYKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSSTNQTTNPTLIEDVKCRRLGLQVVSNLSSELSNVKRAATMDSELLSSDVSKLSKGATNIAEIVQLIEKAGLDETSRKFTESMNNFVRMAEEEIMKLQAQESVSLTLVKEVTEYFHGNLSKEEAHPLRIFLVVRDFIAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHERKHCSNSSDDESTSSP 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 66 100 - -
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 992 1017 - -
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 238 252 - -
Vivi6g03046 1017 Pfam Formin Homology 2 Domain 568 962 IPR015425 -
Vivi6g03046 1017 SMART it6_source 563 977 IPR015425 -
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 378 435 - -
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 217 435 - -
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 43 104 - -
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 296 364 - -
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 43 65 - -
Vivi6g03046 1017 Gene3D Formin, FH2 domain 569 983 IPR042201 -
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 253 267 - -
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 616 636 - -
Vivi6g03046 1017 ProSiteProfiles Formin homology-2 (FH2) domain profile. 563 988 IPR015425 -
Vivi6g03046 1017 PANTHER FORMIN-RELATED 363 1010 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi6g03046 1017 MobiDBLite consensus disorder prediction 272 289 - -
Vivi6g03046 1017 SUPERFAMILY Formin homology 2 domain (FH2 domain) 510 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03046 Vivi-Chr6 118010738 118014753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03046 529 1004 FH2 protein (formin) Gene Family AT3G25500 69.592 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03046 - - gmx:100801837 974.926