Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02997 ATGTGTGGGATATTCGCGTATCTGAATTACAACGTGGAAAGAGAGAGAAGTTACATCTTGCAGGTTCTCTTCAACGGTTTAAGACGGTTAGAGTATCGCGGTTACGATTCCGCCGGAATCGCCATCGATTCTTCTTCTCCTCCAAAACCTCAATGCTCCTCCAATTCCGATTCCGATTTCACTTCCTCTCCTCCTCTTGTCTTCCGCCAAGAAGGCAACATCGAATCCCTCGTTAAATCCGTATACCAAGAGGTTGATGAAACTGCACTGAACTTGAAGGAGAGTTTCAGTACGCATGCTGGAATTGCGCACACGCGTTGGGCTACACACGGTGAGCCTGCTCCGCGAAATAGTCATCCTCAAACTTCAGGTCCTGCTAATGAATTCATGGTTGTTCACAATGGTGTTATCACTAATTATGAGGTTTTGAAGGCAACATTGATCCTACATGGCTTCACATTTAAATCGGAAACTGATACGGAAGTCATTCCCAAACTTGCCAAGTTTGTTTATGATAAAGCAAATGAAGCTGCTGGTGATCAGGTTGTTACCTTCAGTCAAGTTGTGCTGGAAGTTATGAGGCATCTTGAAGGAGCCTATGCACTTATTTTCAAAAGTTCATATTATCCTAATGAATTGATTGCTTGCAAGCTTGGTAGCCCGCTGCTCCTAGGTGTTAAAGAATTGGAAGAAAATAAGGATAATGGCTCTGTTTTTGAGGAAAATAAATTCCTATCAAAAGATGGAAAGCCCAAGGAATTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACCAAGAAAGTGCTAGTTATTGAGGATGGTGAAGTTGTGCATATCAAGGATGGCGGGGTTTCTATTTTGAAGTATGAGAATGACATGGGAAAACCCATCACTTCTTTCTCCAGAGCTTCTTCAGTGCGACGTGCATTATCTGTTCTTGAAATGGAGGTTGAGCAAATAAATAAAGGACATTATGAGCATTACATGCAAAAGGAAATTCATGAGCAACCAGAGTCTCTAACAACCACAATGAGGGGGAGGCTTATACGTGGGGGATCTAGCAAATCCAAGTCTGTTCTGTTAGGTGGACTAAAGGATCACCTCAAAACTATCAGGCGAAGTAGAAGAATAGTTTTCATTGGTTGTGGAACAAGTTATAATGCTGCTTTGGCAGCTAGACCAATCTTTGAAGAACTTTCAGGTATTCCTGTTACTATGGAAATCGCTAGTGATTTATTGGATCGGGAGGGACCAATATACCGAGAAGATACAGCCGTTTTTGTTAGTCAATCCGGCGAAACTGCGGATACTTTACTTGCACTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGGGTAACAAATACTGTTGGTAGTGCAATAGCAAGGAACACACACTGCGGTGTTCATATAAATGCAGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATACACAAGCCAAATAGTAGTGATGGCCATGCTGTCTCTTGCAATAGGAGGCGATACTATTTCCAATAAAGCAAGAAGAGAAGCTATCATAGATAGTCTTTATGACCTACCAAACAAAGTCAGAGAGGTGCTGGAGCTTGATCAAGAGATGAAGGATCTAGCAAATCTATTGATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACCGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTTATGCATAGTGAAGGAATACTCGCGGGCGAAATGAAGCACGGTCCTTTGGCATTGGTCGATGAAAGTCTCCCGATTGTTGTTATTGCTACACGTGATGCTTGCTTCAGCAAACAGCAGTCTGTTATTCAGCAACTTCATGCCCGTAGAGGTCGTCTGATAGTTATGTGTTCAGAAGGGGATGCTGCTTCTGTATGCCCTGGTAAATCGTGTAGGACAATTGAAGTTCCACAGGTTGAGGATTGTCTTCAGCCTGTGATTAATGTTGTTCCATTACAGTTACTGGCATATCATCTCACCGTACTGAGGGGATTTAACGTTGACCAGCCTCGGAATCTTGCTAAGAGTGTCACTACGCAGTAA 2082 0.4304 MCGIFAYLNYNVERERSYILQVLFNGLRRLEYRGYDSAGIAIDSSSPPKPQCSSNSDSDFTSSPPLVFRQEGNIESLVKSVYQEVDETALNLKESFSTHAGIAHTRWATHGEPAPRNSHPQTSGPANEFMVVHNGVITNYEVLKATLILHGFTFKSETDTEVIPKLAKFVYDKANEAAGDQVVTFSQVVLEVMRHLEGAYALIFKSSYYPNELIACKLGSPLLLGVKELEENKDNGSVFEENKFLSKDGKPKELFLSSDANAVVEHTKKVLVIEDGEVVHIKDGGVSILKYENDMGKPITSFSRASSVRRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRGGSSKSKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPIFEELSGIPVTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGVTNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLSLAIGGDTISNKARREAIIDSLYDLPNKVREVLELDQEMKDLANLLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDESLPIVVIATRDACFSKQQSVIQQLHARRGRLIVMCSEGDAASVCPGKSCRTIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02997 693 Pfam SIS domain 544 675 IPR001347 GO:0097367|GO:1901135
Vivi6g02997 693 Pfam SIS domain 373 498 IPR001347 GO:0097367|GO:1901135
Vivi6g02997 693 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 300 IPR029055 -
Vivi6g02997 693 ProSiteProfiles SIS domain profile. 540 683 IPR001347 GO:0097367|GO:1901135
Vivi6g02997 693 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 284 IPR017932 -
Vivi6g02997 693 ProSiteProfiles SIS domain profile. 369 508 IPR001347 GO:0097367|GO:1901135
Vivi6g02997 693 CDD SIS_GlmS_GlmD_1 378 503 IPR035466 -
Vivi6g02997 693 MobiDBLite consensus disorder prediction 42 61 - -
Vivi6g02997 693 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 693 - -
Vivi6g02997 693 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 291 IPR029055 -
Vivi6g02997 693 CDD SIS_GlmS_GlmD_2 535 691 IPR035490 -
Vivi6g02997 693 CDD GFAT 2 281 IPR047084 -
Vivi6g02997 693 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 325 542 - -
Vivi6g02997 693 MobiDBLite consensus disorder prediction 44 61 - -
Vivi6g02997 693 Gene3D - 325 692 - -
Vivi6g02997 693 SUPERFAMILY SIS domain 324 692 IPR046348 GO:0097367|GO:1901135
Vivi6g02997 693 Gene3D - 529 678 - -
Vivi6g02997 693 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 2 305 - -
Vivi6g02997 693 Pfam Glutamine amidotransferase domain 96 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02997 Vivi-Chr6 117340172 117346856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02997 21 238 PRT Gene Family AT2G16570 24.775 6.62e-07 50.8