Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02988 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCACCCCTCTTCGCCCTCCTCCTCATCTTTTAGGAAAAGCAGAAGAAATAGTAAAAAGAAGCATGGATCAAGAGGCTCTTCAGTTGAGTATTGGAGGAATGAGCCTCTTCATAAGATCCCTGATAGGGTCTTCCTTAATGGATCATCGGAATTTGCTTCCTTGTTCACTCAACAAGGCAAGAAGGGTACCAACCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACAATTTTCTGCGGAGTTTTCGATGGCCATGGTCCATATGGTCACATGGTTGCAAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATACTCATTGGGAACTTAGTGTGTCTGGTGGGGAAGTCCTCAAGGAGATTAGCAATAATGCTACAGGAAGCGCAAACTCAGAAGATACAGCATTTATATCTGCTGATGAGGAATCCAGGGTATCCGTTGATGCTGAGGAAATGGAAAAATTCCCGGAAATCTTTCAAACACTTAAAGAATCCTTTTTAAAGGCTTTCAAAGTTATGGATAGAGAATTGAAGACGCACCAAACTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTTTGGTTAAGCAGGGTCATGATCTTGTTATTGGAAATATCGGTGACTCTAGAGCTGTGTTGGGTACAAGGGAGAAAGATGGTTCTCTTGCTGCAGTCCAGTTAACTGTGGATTTAAAACCTAATCTTCCAGCTGAAGCAGAGAGAATTCGCAAATGTAGAGGACGTGTTTTTGCTCTTCGTGATGAACCTGATGTTTGTCGAGTCTGGCTGCCGAACAATGATTCCCCTGGCCTTGCCATGGCAAGGGCTTTTGGAGATTTTTGTCTGAAAGATTTTGGACTAATATCTGTTCCAGATGTGTCACACAGAAGACTCACTGAGAAGGATGAATTTGTTGTCATGGCAACCGATGGGATTTGGGATGTGCTATCAAACAAGGAAGTGGTAGACATAATAGCAGCTGCACCACGGCGTGCAACAGCAGCTAGATCACTGGTTGAGTCAGCAGTTAGAGCATGGAGATATAAATATCCAACTTCAAAAGTTGACGATTGTGCTGTGATTTGTCTCTTTCTAGACTCAGGCATGCAAAAAATCTCCACTGCTTCTAATGCAAACAATTCCAAAGAGCATCCTCGAAGTTCAGGAATTCAAGTCAGCGACAACGGTGACAACGAAGATGTTTCTGAACCTAATGCTCTAGTAAGATCAGGAACATGCAGAGAAATCAATAATAATAACAACAATGAGGAGGAGGAAGAGATAGAGATAGAAGCTGAGACAGAAAAAGAGTGGTCTGCTCTTGAAGGTGTATCGCGTGTCAACACATTATTAAACCTTCCGAGATTTGTTCCTGATAAAGACGACAAATCAGCCGCAGCAGCAGCAGGGACCAGAAAACTCAAATGA 1479 0.4307 MGSCFSAESRSPHPSSPSSSSFRKSRRNSKKKHGSRGSSVEYWRNEPLHKIPDRVFLNGSSEFASLFTQQGKKGTNQDAMVVWENFCSREDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNTHWELSVSGGEVLKEISNNATGSANSEDTAFISADEESRVSVDAEEMEKFPEIFQTLKESFLKAFKVMDRELKTHQTIDCFCSGTTAVTLVKQGHDLVIGNIGDSRAVLGTREKDGSLAAVQLTVDLKPNLPAEAERIRKCRGRVFALRDEPDVCRVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVSHRRLTEKDEFVVMATDGIWDVLSNKEVVDIIAAAPRRATAARSLVESAVRAWRYKYPTSKVDDCAVICLFLDSGMQKISTASNANNSKEHPRSSGIQVSDNGDNEDVSEPNALVRSGTCREINNNNNNEEEEEIEIEAETEKEWSALEGVSRVNTLLNLPRFVPDKDDKSAAAAAGTRKLK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02988 492 SUPERFAMILY PP2C-like 61 383 IPR036457 -
Vivi6g02988 492 Gene3D - 60 384 IPR036457 -
Vivi6g02988 492 PANTHER PROTEIN PHOSPHATASE 31 380 IPR015655 GO:0004722|GO:0006470
Vivi6g02988 492 MobiDBLite consensus disorder prediction 1 41 - -
Vivi6g02988 492 CDD PP2Cc 63 382 IPR001932 -
Vivi6g02988 492 Coils Coil 430 453 - -
Vivi6g02988 492 MobiDBLite consensus disorder prediction 473 492 - -
Vivi6g02988 492 ProSiteProfiles PPM-type phosphatase domain profile. 63 382 IPR001932 -
Vivi6g02988 492 SMART PP2C_4 54 380 IPR001932 -
Vivi6g02988 492 MobiDBLite consensus disorder prediction 1 23 - -
Vivi6g02988 492 FunFam probable protein phosphatase 2C 33 58 385 - -
Vivi6g02988 492 MobiDBLite consensus disorder prediction 392 424 - -
Vivi6g02988 492 Pfam Protein phosphatase 2C 112 360 IPR001932 -
Vivi6g02988 492 MobiDBLite consensus disorder prediction 392 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02988 Vivi-Chr6 117287133 117291493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02988 1 477 PP2C-type Phosphatase Gene Family AT3G02750 61.509 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02988 - - cam:101510446 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02988 6 117287133 117291493 Vivi6g02988 6 117287133 117291493 ECH