Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02984 ATGAATTTGAATGTAACTACATCACAAAAACAAGACAAAAACGAAAATATCATGAACAAAAGTAACAGCGAAAACAAAAATGGCTGTGATGGAATAGTTGTATCAGATCCGAATGGAGAAACTGTTTTTGGGTTTTCACGGAAAAAAAGCCTAGCTGAGAGAAGGGGTTTCAATAAAACTGCACCAAATATCAACACAAACCCTTTGGTTTCTCTTCCAGTTCGATCACCGCAATTCACAATACCACCGGGAATTAGTCCAACCGCATTGCTTGAGTCCCCCGTCATGCTTCCTAATTCTCAGGCCATGCCATCTCCCACCACGGGGAGTTTTCCCATGCTTCAACCTCCAATGCTCACTTCCATTACAAAAGATGAAGGAAACATGGATATTTCTACTTCCTCTCATATTGCTGCCTCTTCAAAATTCAACTCTCAAGCCGATTTTACTTCTAATTCTCTAAATCAGGGTTCTAATAATTATCAAATGATGAATGGAGGGCATAAAGTCGATCAAATATTTGTTCAAGATCAACCACCAATGGATTTTTCATTCTCAGAAGATTTTTCAAATGATTTTTTTATGAAAAATAGTGGATTCCCTTTATACAGTGATTTGAAAGTGGCAGATATGATGGTTGATAATATTGATGTTCCAATCTCTCATTCTGAAGAAGTTAGTGATGAAAGTAATTTTCTTGAAAACTCGGTCCCCGTCGATGATATCGGTCGACAACATGTTTTAGAAGTAGAACAAAAAGAAACGTGTTATGCGACTGGAGCAAAGAACTCCGACGATGGTTATAATTGGAGAAAATATGGACAAAAACAAGTAAAAGGAAGTGAGTTTCCAAGAAGCTACTATAAATGTACTCAAACGAGTTGTCAGGTGAAGAAAAAAGTTGAAAGATCACATGATGGCCAGATAACTGAGATTATTTACAAGGGTAATCACAACCATGCGAAACCACATTCGAATCGTCGTGGATCAATGCCTTTGAATGATGAGATTTTAGAAGCTGCTGAAGCCAATGAAACATGTGATAGAGTTGAGACTGATTCAGTATGGAGAAATAATCAGTCGCGAGAAAGAGATGCAAACCATGATTCTGAGAGGAAGCTTGTTAGTCAAGAAAGGGCATCCCCGCCTTCTTTTACAACCGAGCTTTCAGATCCTGCGAAGAGAGCTAGATCATTAGGTGTATTTGAATCGGATGAAGCTCAAGAGAATTCTTCTGCGCATGTTAATCGTGATGGTAATATAGATGAATCCACTCAAATAGTTTTACCAAATGAAGACGCTGCTGAAGATGAATCTGAATCAAAAAGAAGGAAAAAAGAAAGCTATCCGACTGAACCAATGATGCCTGCGAGGGCTATTCGTGAGCCGCGAGTGGTAGTCCAAATCGAGAGTGAAATTGACATACTTGATGATGGTTATCGTTGGCGAAAGTATGGCCAAAAGGTTGTCAAAGGGAATCCAAACCCAAGGAGCTACTACAAATGCACAAGTGCTGGATGTGGTGTAAGGAAACATGTGGAAAGAGCTTCACATAATCTAAAATTTGTTATTACTACTTATGAGGGAAAACATAACCATGAGGTTCCCGCTGCTAAGAATAGCCATCATATAAGCTCAAATGATTTTGGTTCACATTCAAGTGGTGCTAATGGGTTACATGGGAATGCTGGTATCCTAAAGTCTGAAACACATCAACCTCTTGCATCTCATTTTGATAGAAAACCCGATCTTAGCGATGAGTTTATGCGGTCAAGTTTGATGGGAAGTTTCGCGAATGATATGAAGTTTGGACCTTCCTCCATATCCCAAATGAAGTATTCTTCCTTGGATAATATTGTACCATATGGATGCACCTATGGAACGAATCTCGAACGTGGTGTTGCGCCTCAAGTCGGACATATTCCCCCAATGTTACCGGAATATCCAATGCCATTACCATTGAATCTTCCTTCATCTGGAAATTTTTCTCTAGATGGAATGAATTTCAACTATGCAAAACCAGTGAATTGTGTTCAGTCTTACCTTTCAAATCAGCAGATGCAGGACTTTGATACAAGATTTCTAAGGCCTAAAGAGGAGTTGAATGACGATTCTTTGTATACTTCATGTCCAACCTCTTTTGATCATGCAAGTTCCTCACTGAATCCACCATCAACATCACCACAATCCATTTATCAAAGTGTCATGCAGAATTTCCCTTCATAA 2226 0.3904 MNLNVTTSQKQDKNENIMNKSNSENKNGCDGIVVSDPNGETVFGFSRKKSLAERRGFNKTAPNINTNPLVSLPVRSPQFTIPPGISPTALLESPVMLPNSQAMPSPTTGSFPMLQPPMLTSITKDEGNMDISTSSHIAASSKFNSQADFTSNSLNQGSNNYQMMNGGHKVDQIFVQDQPPMDFSFSEDFSNDFFMKNSGFPLYSDLKVADMMVDNIDVPISHSEEVSDESNFLENSVPVDDIGRQHVLEVEQKETCYATGAKNSDDGYNWRKYGQKQVKGSEFPRSYYKCTQTSCQVKKKVERSHDGQITEIIYKGNHNHAKPHSNRRGSMPLNDEILEAAEANETCDRVETDSVWRNNQSRERDANHDSERKLVSQERASPPSFTTELSDPAKRARSLGVFESDEAQENSSAHVNRDGNIDESTQIVLPNEDAAEDESESKRRKKESYPTEPMMPARAIREPRVVVQIESEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCGVRKHVERASHNLKFVITTYEGKHNHEVPAAKNSHHISSNDFGSHSSGANGLHGNAGILKSETHQPLASHFDRKPDLSDEFMRSSLMGSFANDMKFGPSSISQMKYSSLDNIVPYGCTYGTNLERGVAPQVGHIPPMLPEYPMPLPLNLPSSGNFSLDGMNFNYAKPVNCVQSYLSNQQMQDFDTRFLRPKEELNDDSLYTSCPTSFDHASSSLNPPSTSPQSIYQSVMQNFPS 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02984 741 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 91 553 IPR044810 GO:0003700
Vivi6g02984 741 SMART WRKY_cls 264 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 SMART WRKY_cls 476 535 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 MobiDBLite consensus disorder prediction 435 451 - -
Vivi6g02984 741 FunFam WRKY transcription factor 33 463 529 - -
Vivi6g02984 741 SUPERFAMILY WRKY DNA-binding domain 469 536 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 MobiDBLite consensus disorder prediction 1 29 - -
Vivi6g02984 741 MobiDBLite consensus disorder prediction 714 733 - -
Vivi6g02984 741 FunFam WRKY transcription factor 251 324 - -
Vivi6g02984 741 MobiDBLite consensus disorder prediction 404 427 - -
Vivi6g02984 741 MobiDBLite consensus disorder prediction 344 453 - -
Vivi6g02984 741 MobiDBLite consensus disorder prediction 1 33 - -
Vivi6g02984 741 Gene3D WRKY domain 463 529 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 Pfam WRKY DNA -binding domain 477 534 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 Pfam WRKY DNA -binding domain 265 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 SUPERFAMILY WRKY DNA-binding domain 261 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 ProSiteProfiles WRKY domain profile. 471 536 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 Coils Coil 333 353 - -
Vivi6g02984 741 Gene3D WRKY domain 253 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 ProSiteProfiles WRKY domain profile. 259 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02984 741 MobiDBLite consensus disorder prediction 344 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02984 Vivi-Chr6 117115130 117119855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02984 72 541 WRKY Transcription Factor Family AT4G26640 38.716 3.67e-86 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi6g02984 WRKY 4.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02984 K18835 - gmx:100800211 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02984 6 117115130 117119855 Vivi6g02984 6 117115130 117119855 ECH