Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02975 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCACCCCTCTTCGCCCTCCTCCTCATCTTTTAGGAAAAGCAGAAGAAATAGTAAAAAGAAGCATGGATCAAGAGGCTCTTCAGTTGAGTATTGGAGGAATGAGCCTCTTCATAAGATCCCTGATAGGGTCTTCCTTAATGGATCATCGGAATTTGCTTCCTTGTTCACTCAACAAGGCAAGAAGGGTACCAACCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACAATTTTCTGCGGAGTTTTTGATGGCCATGGTCCATATGGTCACATGGTTGCAAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATACTCATTGGGAACTTAGTGTGTCTGGTGGGGAAGTCCTCAAGGAGATTAGCAATAATGCTACAGGAAGCGCAAACTCAGAAGATACAGCATTTATATCTGCTGATGAGGAATCCAGGGTATCCGTTGATGCTGAGGAAATGGAAAAATTCCCGGAAATCTTTCAAACACTTAAAGAATCCTTTTTAAAGGCTTTCAAAGTTATGGATAGAGAATTGAAGACGCACCAAACTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTTTGGTTAAGCAGGGTCATGATCTTGTTATTGGAAATATCGGTGACTCTAGAGCTGTGTTGGGTACAAGGGAGAAAGATGGTTCTCTTGCTGCAGTCCAGTTAACTGTGGATTTAAAACCTAATCTTCCAGCTGAAGCAGAGAGAATTCGCAAATGTAGAGGACGTGTTTTTGCTCTTCGTGATGAACCTGATGTTTGTCGAGTCTGGCTGCCGAACAATGATTCCCCTGGCCTTGCCATGGCAAGGGCTTTTGGAGATTTTTGTCTGAAAGATTTTGGACTAATATCTGTTCCAGATGTGTCACACAGAAGACTCACTGAGAAGGATGAATTTGTTGTCATGGCAACCGATGGGATTTGGGATGTGCTATCAAACAAGGAAGTGGTAGACATAATAGCAGCTGCACCACGGCGTGCAACAGCAGCTAGATCACTGGTTGAGTCAGCAGTTAGAGCATGGAGATACAAATATCCAACTTCAAAAGTTGACGATTGTGCTGTGATTTGTCTCTTTCTAGACCCAGGCATGCAAAAAATCTCCACTGCTTCTAATGCAAACAATTCCAAAGAGCATCCTCGAAGTTCAGGAATTCAAGTCAGCGACAACGGTGACAACGAAGATGTTTCTGAACCTAATGCTCTAGTAAGATCAGGAACATGCAGAGAAATCAATAATAATAACAACAATGAGGAAGAGGAAGAGATAGAGATAGAAGCTGAGACAGAAAAAGAGTGGTCTGCTCTCGAAGGTGTATCGCGTGTCAACACATTATTAAACCTTCCAAGATTTGTTCCTGATAAAGACGACAAATCAGCTGCAGCAGCAGGGACCAGAAAACTCAAATGA 1476 0.4295 MGSCFSAESRSPHPSSPSSSSFRKSRRNSKKKHGSRGSSVEYWRNEPLHKIPDRVFLNGSSEFASLFTQQGKKGTNQDAMVVWENFCSREDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNTHWELSVSGGEVLKEISNNATGSANSEDTAFISADEESRVSVDAEEMEKFPEIFQTLKESFLKAFKVMDRELKTHQTIDCFCSGTTAVTLVKQGHDLVIGNIGDSRAVLGTREKDGSLAAVQLTVDLKPNLPAEAERIRKCRGRVFALRDEPDVCRVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVSHRRLTEKDEFVVMATDGIWDVLSNKEVVDIIAAAPRRATAARSLVESAVRAWRYKYPTSKVDDCAVICLFLDPGMQKISTASNANNSKEHPRSSGIQVSDNGDNEDVSEPNALVRSGTCREINNNNNNEEEEEIEIEAETEKEWSALEGVSRVNTLLNLPRFVPDKDDKSAAAAGTRKLK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02975 491 PANTHER PROTEIN PHOSPHATASE 31 380 IPR015655 GO:0004722|GO:0006470
Vivi6g02975 491 Pfam Protein phosphatase 2C 112 360 IPR001932 -
Vivi6g02975 491 Gene3D - 60 383 IPR036457 -
Vivi6g02975 491 MobiDBLite consensus disorder prediction 1 41 - -
Vivi6g02975 491 MobiDBLite consensus disorder prediction 392 443 - -
Vivi6g02975 491 CDD PP2Cc 63 382 IPR001932 -
Vivi6g02975 491 FunFam probable protein phosphatase 2C 33 58 385 - -
Vivi6g02975 491 Coils Coil 430 453 - -
Vivi6g02975 491 ProSiteProfiles PPM-type phosphatase domain profile. 63 382 IPR001932 -
Vivi6g02975 491 SMART PP2C_4 54 380 IPR001932 -
Vivi6g02975 491 SUPERFAMILY PP2C-like 61 383 IPR036457 -
Vivi6g02975 491 MobiDBLite consensus disorder prediction 1 23 - -
Vivi6g02975 491 MobiDBLite consensus disorder prediction 392 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02975 Vivi-Chr6 116964052 116968415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02975 1 477 PP2C-type Phosphatase Gene Family AT3G02750 61.321 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02975 - - cam:101510446 755.362