Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02909 ATGGACCTTAATTTTCTGTTTTCACTTCTTCTCATTGCTCCTTGCTTTCTATTAACCTTTCATGCCAATGCTGAGATAACTTCCACATATATAATCCATATGAACAAATCCCTCTTTCCTCAAATCTTCACTACTCATCATGATTGGTTCGAATCCACCGTTCATTCCTTAAAATCAAAAACACTAGCATTTGATGATCATGGTCATGGTCATGATCAAGATCAATCATCGAAGAAATCAATGAAGACGCTAGTGTACACCTATGATAATGCCATGTATGGCTTTAGTGCTGTTCTATCTTCAAAGGAGTTAGAGAGTCTTAAAAACATTGATGGCTTTGTTGCAGCCTATCAAGATAGAACAGTCACCGTTGACACAACTCATACCTATGAGTTTCTGAACCTAGATTCTCCGAGTGGACTATGGCATGCTTCGAATTTCGGTGAGGATATAATTGTTGGAGTCATTGATTCTGGTGTATGGCCTGAGAGTAAAAGCTTTCGAGACGATGGCATGACGAAGAAAATTCCGAGCAAATGGAAAGGAACATGTGAAATTGGTCAAGAGTTTAATGCTTCCATGTGCAACTTCAAGTTGATTGGAGCTAGATATTTCAACAAAGGAGTCATTGCTTCAAATCCAAATGTGACAATCCTCATGAACTCGGCTAGAGACTTTAGAGGACATGGAACTCACACATCATCAACTGTTGCAGGTAACTATGTTAAGGGAGCTTCTTATTTTGGTTATGCTAAAGGAGTAGCAAGAGGCATTGCACCAAAAGCTAGGCTTGCTATGTATAAAACCATTTGGGCAGAAGGCCGTTTGGCTTCCGATGTTTTAGCTGGAATGGACCAAGCAATTGTTGATGGTGTTGATGTGATTTCAATTTCCATGGGATTCGATGGTGCTCCGCTGTACGAAGATCCTATTGCAATAGCTTCTTTTGCAGCTATGGAGAAAGGGATTGTTGTTTCATCTTCTGCAGGTAATGCAGGACCTGATCTTGGAACCTTGCACAATGGCATCCCTTGGCTAATTACAGTGGCTGCAGGAACAGTAGACAGAACTTTTGGAACTCTTGTTTTGGGAAATGGACAAAACATCATTGGTTGGACTTTGTTTCCAGCAAATGCTATAGTGGAAAATCTTCCACTTGTTTACAACAAAACTTTATCTTCATGCAACTCAGAAAAATTGTTATCTCAAGTTGACAAACAAGTAGTCCTTTTTTGTGACGACGAATCAACGACAAACTCAACGTCAGTGTTTCATCAAATCAATACTGTTGCAGAAACAAATGTGTTAGGAGCAGTTTTTGTTTCTGAAAATCCTAAATTAATCGATTTAGCAAATATTTACTCCCCGATTATCGTAATCAAGCCAAAAGACGCAGAATCCGTGATCAACTATGCAAAAAGTCATCAAAATCCAACAGCAAGTATTAGGTTTCAAGAAACATATGTTGGAATAAAGCCAGCACCAACTGCAGCAGAATACTCTTCAAGAGGTCCTTCACATAGCCTTCCATGGATTTTGAAGCCTGACATAATGGCACCGGGCTCTAGAATTCTCGCTGCCTATGTTCCTCGTAAAGCATCGGGTAGAATCGGCTCAAATGTGTTCTTATCAAGTGACTACAATTTCATGTCAGGAACATCAATGGCTTGCCCTCATGTTTCCGGCGTTGTTGCTCTTCTGAAATCTGCACATCCACAATGGAGTGCTGCTGCTATACGATCTGCATTAATAACCACAGCTAATCCTATGGATAACACACAAAGTCCTATTAAGGATAACGGTTACCCTACTCAACAAGCTTCTCCTCTCGCTATCGGTGCTGGTGAGATCGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGTTACTCCACAAGACTATGTTAATCTCCTATGTGGTTCAAACTTCACAAAGAACCAAATTTTAACAATTACAAGATCAAGTTCTTATGATTGTGAAAACCCTTCTTTGGATCTTAATTACCCTTCATTTATAGCTTTTTACAGTAACAAAACAAGATCAATGGTTCATAAATTTAAGAGGACTGTTACTAATGTCGGTGATGGTGCTGCTACATATAAAGCTAAAGTGACACATCCAAAAGGTTGTTTGGTGACAGTGTCACCTGATATATTAAGTTTTAGTTACAGAAATGAGAAACAAAGTTACTACATTGTCATAAAGTGTGTTATGTACAAGAAGGAAAATGTTTCATCTGGGGATCTTGTTTGGGCTGAAGATGGTGGAACACATACCGTTAGAAGTCCTATTGTAGTGGCACCAAGTGGAATTGTATGA 2325 0.3914 MDLNFLFSLLLIAPCFLLTFHANAEITSTYIIHMNKSLFPQIFTTHHDWFESTVHSLKSKTLAFDDHGHGHDQDQSSKKSMKTLVYTYDNAMYGFSAVLSSKELESLKNIDGFVAAYQDRTVTVDTTHTYEFLNLDSPSGLWHASNFGEDIIVGVIDSGVWPESKSFRDDGMTKKIPSKWKGTCEIGQEFNASMCNFKLIGARYFNKGVIASNPNVTILMNSARDFRGHGTHTSSTVAGNYVKGASYFGYAKGVARGIAPKARLAMYKTIWAEGRLASDVLAGMDQAIVDGVDVISISMGFDGAPLYEDPIAIASFAAMEKGIVVSSSAGNAGPDLGTLHNGIPWLITVAAGTVDRTFGTLVLGNGQNIIGWTLFPANAIVENLPLVYNKTLSSCNSEKLLSQVDKQVVLFCDDESTTNSTSVFHQINTVAETNVLGAVFVSENPKLIDLANIYSPIIVIKPKDAESVINYAKSHQNPTASIRFQETYVGIKPAPTAAEYSSRGPSHSLPWILKPDIMAPGSRILAAYVPRKASGRIGSNVFLSSDYNFMSGTSMACPHVSGVVALLKSAHPQWSAAAIRSALITTANPMDNTQSPIKDNGYPTQQASPLAIGAGEIDPNRAMNPGLIYDVTPQDYVNLLCGSNFTKNQILTITRSSSYDCENPSLDLNYPSFIAFYSNKTRSMVHKFKRTVTNVGDGAATYKAKVTHPKGCLVTVSPDILSFSYRNEKQSYYIVIKCVMYKKENVSSGDLVWAEDGGTHTVRSPIVVAPSGIV 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02909 774 Gene3D - 640 770 - -
Vivi6g02909 774 FunFam Subtilisin-like protease SBT1.9 19 125 - -
Vivi6g02909 774 SUPERFAMILY Subtilisin-like 125 627 IPR036852 GO:0004252|GO:0006508
Vivi6g02909 774 CDD PA_subtilisin_like 360 482 - -
Vivi6g02909 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 768 IPR045051 -
Vivi6g02909 774 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Vivi6g02909 774 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Vivi6g02909 774 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Vivi6g02909 774 ProSiteProfiles Serine proteases, subtilase domain profile. 129 623 - -
Vivi6g02909 774 Pfam Fibronectin type-III domain 667 768 IPR041469 -
Vivi6g02909 774 Gene3D - 355 489 - -
Vivi6g02909 774 Pfam Peptidase inhibitor I9 29 124 IPR010259 -
Vivi6g02909 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Vivi6g02909 774 CDD Peptidases_S8_3 122 588 IPR034197 -
Vivi6g02909 774 Gene3D Peptidase S8/S53 domain 150 636 IPR036852 GO:0004252|GO:0006508
Vivi6g02909 774 FunFam Subtilisin-like protease SBT1.5 150 364 - -
Vivi6g02909 774 Pfam Subtilase family 148 595 IPR000209 GO:0006508|GO:0008236
Vivi6g02909 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 124 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02909 Vivi-Chr6 116105214 116107812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02909 27 771 Subtilisin-like Serine Gene Family AT5G67090 41.699 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02909 - - gmx:100779169 1121.69