Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02908 ATGGAACCTAACTTTGTGTCTTCATTTTTCCTCATAACTCCTTGGTTTCTATTAACCTTTTTTAGCAATGCTGAGACTTCCACATACATAATCCATATGAATAAATCCATCTTTCCTCAAGTTTTTACAACTCATCATGATTGGTTTCAATCCACCATTCATTCCATAAAATCAAAAACCCTACTACTTGATGCTCATGATCAACAACCATCCAAGCAATCACACAAGAAACTAGTATACGCCTATGATAACGCTATGTATGGCTTTAGTGCAGTGTTATCTTCAAATGAGTTAGAGACTCTTAACAACATTGATGGATTTGTGTCTGCATATCAAGACAGAACAGCCACTCTTGACACAACTCATACTTTTGAATTTCTCTCCCTAGATTCTCCTAGTGGGCTATGGCATGCTTCGAATTTCGGTGAGGATATAATTGTTGGTGTTATTGATTCTGGTGTGTGGCCTGAGAGTCAAAGCTTCAAAGATGATGGTATGACAAAGAAAATTCCAAGCAAATGGAAAGGAGCATGTGAAGATGGTCAAGAATTCAATGCATCCATGTGCAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGAGTCATTGCTTCAAATCCAAATGTTACAATCATCATGAACTCGGCTAGAGACAGTGTAGGACATGGAACTCACACATCATCAACAGTTGCAGGTAACTATGTTAATGGAGCTTCTTATTTTGGTTATGCTAAAGGAGTGGCAAGAGGCATTGCACCAAAAGCTAGGCTTGCTATTTATAAAGTCAACTGGGAAGAAGGTCTTTTGGCTTCTGATGTTTTAGCTGGAATGGATCAAGCAATTGTGGACGGTGTTGACGTGATTTCAGTTTCCATGGGATTCGATGATGCTCCACTCTATGAAGATCCTATTGCAATAGCTTCATTTGCAGCTATGGAGAAAGGGATTGTTGTTTCATCTTCTGCAGGTAATTCAGGACCTTATCTTGGAACCTTGCATAATGGTATCCCTTGGCTCATTACAGTTGCTGCAGGAACAATAGACAGAACTTTCGGTACTCTTGTTTTGGGAAATGGTAAAAACATTATTGGTTGGACTTTGTTTGCATCAAATGCTACTCTAGTTGAAAATCTTCCACTCGTTTACAATAGAAATTTATCTTCATGCAACTCGGCGAGGCTTTTATCTCGAGTTAACAAACAAGTAATCATTCTTTGTGATGATGAATCAATGTCAAACTCAAAATCAGTCTCCGAGCAAATCAATGTTGTTGCAGAAACAGGAGTGTTAGCGGCAGTTTTTGTCGCTGATAATCCTGATTTAATTGATTCAAGACATTTGTACTCTCCAATTATTGTAATCAAGCCAAAAGATGCAAAATCTGTGATCAGCTACGCAAAACGACAAAAAAATCCTACGGCAAGCATTAGGTTTCAACAAACATATGTTGGAATAAAGCCAGCACCAGTTGCAGCACATTACACTTCAAGAGGTCCTTCACTTAGCTTTCCTTGGATTTTGAAGCCTGACATAATGGCTCCTGGCTCTAGAGTCCTTGCTGCTTACGTTCCGAATAAACCATCGGCTAGAATTGGCACAAATGTGTTCTTATCAAGTGACTACAATTTCATGACAGGAACATCCATGGCTTGTCCTCATGCTTCAGGCGTTGCTGCGCTTCTGAAATCTGCGCATCCACAATGGAGTGCAGCTGCTATAAGATCTGCATTAATAACCACAGCTAATCCTATGGATAATACACAAAATCCAATAAGGGATAGCGCTTACCCTTCTCAACATGCTTCTCCTCTCGCAATCGGTGCTGGTGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGTTACTCCACAGGACTATGTTAATTTCCTATGTGGTTTGGACTTCACAAAGAACCAAATTTTAACAATTACAAGATCAAGTTCTTATGATTGTGAAAACCCTTCTTTGGATTTTAATTACCCTTCATTTATAGATTTTTACAGTAGAAAAACAAGATCGAAGGTTCGCAAATTTAAGAGGACTGTTACCAATGTTGGTGATAGTGCTGCTACATATAGAGCTAAAGTGACACATCCAAAAGGCTGTTTGGTGACAGTGTCACCTGATATATTAACTTTCAGTGATAAAAATGAGAAACAAAGTTACTCCCTTGTTATAAAGTATGTCATGTACAAGAAGGAAAATGTTTCATTTGGGGATCTTGTTTGGATTGAAGATGGTGGAGCACACAGAGTTAGAAGTCCTATTGTAGTGGCATCAAGTGAAATAATATGA 2310 0.3844 MEPNFVSSFFLITPWFLLTFFSNAETSTYIIHMNKSIFPQVFTTHHDWFQSTIHSIKSKTLLLDAHDQQPSKQSHKKLVYAYDNAMYGFSAVLSSNELETLNNIDGFVSAYQDRTATLDTTHTFEFLSLDSPSGLWHASNFGEDIIVGVIDSGVWPESQSFKDDGMTKKIPSKWKGACEDGQEFNASMCNFKLIGARYFNKGVIASNPNVTIIMNSARDSVGHGTHTSSTVAGNYVNGASYFGYAKGVARGIAPKARLAIYKVNWEEGLLASDVLAGMDQAIVDGVDVISVSMGFDDAPLYEDPIAIASFAAMEKGIVVSSSAGNSGPYLGTLHNGIPWLITVAAGTIDRTFGTLVLGNGKNIIGWTLFASNATLVENLPLVYNRNLSSCNSARLLSRVNKQVIILCDDESMSNSKSVSEQINVVAETGVLAAVFVADNPDLIDSRHLYSPIIVIKPKDAKSVISYAKRQKNPTASIRFQQTYVGIKPAPVAAHYTSRGPSLSFPWILKPDIMAPGSRVLAAYVPNKPSARIGTNVFLSSDYNFMTGTSMACPHASGVAALLKSAHPQWSAAAIRSALITTANPMDNTQNPIRDSAYPSQHASPLAIGAGEIDPNRAMNPGLIYDVTPQDYVNFLCGLDFTKNQILTITRSSSYDCENPSLDFNYPSFIDFYSRKTRSKVRKFKRTVTNVGDSAATYRAKVTHPKGCLVTVSPDILTFSDKNEKQSYSLVIKYVMYKKENVSFGDLVWIEDGGAHRVRSPIVVASSEII 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02908 769 Pfam Peptidase inhibitor I9 28 118 IPR010259 -
Vivi6g02908 769 Gene3D - 349 484 - -
Vivi6g02908 769 FunFam Subtilisin-like protease SBT1.9 18 119 - -
Vivi6g02908 769 Gene3D - 635 766 - -
Vivi6g02908 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 763 IPR045051 -
Vivi6g02908 769 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Vivi6g02908 769 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Vivi6g02908 769 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Vivi6g02908 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 119 IPR037045 -
Vivi6g02908 769 FunFam Subtilisin-like protease SBT1.5 144 358 - -
Vivi6g02908 769 Pfam Subtilase family 142 588 IPR000209 GO:0006508|GO:0008236
Vivi6g02908 769 ProSiteProfiles Serine proteases, subtilase domain profile. 123 618 - -
Vivi6g02908 769 Pfam Fibronectin type-III domain 662 763 IPR041469 -
Vivi6g02908 769 SUPERFAMILY Subtilisin-like 119 622 IPR036852 GO:0004252|GO:0006508
Vivi6g02908 769 CDD Peptidases_S8_3 117 583 IPR034197 -
Vivi6g02908 769 Gene3D Peptidase S8/S53 domain 144 631 IPR036852 GO:0004252|GO:0006508
Vivi6g02908 769 CDD PA_subtilisin_like 354 477 - -
Vivi6g02908 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02908 Vivi-Chr6 116087356 116089843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02908 16 768 Subtilisin-like Serine Gene Family AT5G67090 43.115 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02908 - - gmx:100779169 1103.2