Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02868 ATGGTATTCATTGTTATTTGGATCCTCAACTTATCTCTGTTTTATAAGCTAACTGAACTCTGCCGATTCAGTGGTGTAAAGATCTACCCCGGAAGAGGCATCATATTTATTCGTAGTGATTCACAGGAATTTCTAATTGTGAACTCGAAATGTAAGAGGTATTTCCACAACCGTTTGAAGCCTTTGAAGCTCACATGGACTGCCATGTTCAGAAAGCAACACAAGAAAGACATTGCCCAAGAGGCTGTGAAGAAGAGGCACTACGCCACCAAGAAGTCATACTCTAGGTTCATTGGTGGTGCTACCTTGAAAGTCATTCAGAAGAAAAGATCTGAAAAGCCTAAAGTTCGAGATGCAGCCAGAGAAGCTTCTCTCCGTGAAATCAAAGAGAGGATTAAGAAAACAAAGGATTTGAAGGTGTCTGCTAATCTAGAAATAAATGTCTGA 447 0.4027 MVFIVIWILNLSLFYKLTELCRFSGVKIYPGRGIIFIRSDSQEFLIVNSKCKRYFHNRLKPLKLTWTAMFRKQHKKDIAQEAVKKRHYATKKSYSRFIGGATLKVIQKKRSEKPKVRDAAREASLREIKERIKKTKDLKVSANLEINV 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02868 148 FunFam 60S ribosomal protein L24 16 77 - -
Vivi6g02868 148 Coils Coil 125 145 - -
Vivi6g02868 148 Gene3D Ribosomal protein L24e 17 77 IPR038630 -
Vivi6g02868 148 Gene3D - 82 146 - -
Vivi6g02868 148 Pfam Ribosomal protein L24e 18 80 IPR000988 -
Vivi6g02868 148 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 71 - -
Vivi6g02868 148 ProSitePatterns Ribosomal protein L24e signature. 23 40 IPR023442 -
Vivi6g02868 148 CDD Ribosomal_L24e_L24 18 69 IPR000988 -
Vivi6g02868 148 PANTHER 60S RIBOSOMAL PROTEIN L24 18 141 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02868 Vivi-Chr6 114785003 114786947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02868 18 132 Cytoplasmic Ribosomal Protein Gene Family AT3G53020 82.609 5.11e-66 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02868 K02896 - thj:104826938 211.46