Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02866 ATGATAATACATGTATGCTATTTCTTATTGATGATGATGATTGCGCTTGTTGGGAGAACTGAACTCTGCCGATTCAGTGGTGTAAAGATCTACCCCGGAAGAGGCATCATATTTATTCGTAGTGATTCACAGGAATTTCTAATTGTGAACTCGAAATGTAAGAGGTATTTCCACAACCGTTTGAAGCCTTTGAAGCTCACATGGACTGCCATGTTCAGAAAGCAACACAAGAAAGACATTGCCCAAGAGGCTGTGAAGAAGAGGCACTACGCCACCAAGAAGTCATACTCTAGGTTCATTGTTGGTGCTACCTTGAAAGTCATTCAGAAGAAAAGATCTGAGAAGCGTAAAGTTCGAGATGCAGCCAGAGAAGCTGCTCTCCGTCACATGAAACAGAGACTGAAACTGAAAACATAA 417 0.4173 MIIHVCYFLLMMMIALVGRTELCRFSGVKIYPGRGIIFIRSDSQEFLIVNSKCKRYFHNRLKPLKLTWTAMFRKQHKKDIAQEAVKKRHYATKKSYSRFIVGATLKVIQKKRSEKRKVRDAAREAALRHMKQRLKLKT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02866 138 ProSitePatterns Ribosomal protein L24e signature. 25 42 IPR023442 -
Vivi6g02866 138 Gene3D - 84 138 - -
Vivi6g02866 138 Pfam Ribosomal protein L24e 19 82 IPR000988 -
Vivi6g02866 138 FunFam 60S ribosomal protein L24 16 79 - -
Vivi6g02866 138 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 73 - -
Vivi6g02866 138 PANTHER 60S RIBOSOMAL PROTEIN L24 19 132 IPR000988 -
Vivi6g02866 138 CDD Ribosomal_L24e_L24 19 71 IPR000988 -
Vivi6g02866 138 Gene3D Ribosomal protein L24e 19 79 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02866 Vivi-Chr6 114746158 114761661 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02866 16 134 Cytoplasmic Ribosomal Protein Gene Family AT3G53020 78.151 1.21e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02866 K02896 - tcc:18586592 204.912