Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02861 ATGGAAAGCCAAGACCCTCCACCTCAAAACAACACTTCTAGTTCTATCCCCTTCTTCTTTACGCCTTCTTTACCAAATTATCCTTTGGAGTCTCAAGATCAAGGACTAATTGGTGATATTGACTCATGGGGCAATTTTTTCTTAGGACAAAGTAACAATAGTTTGCTTGTTGAGGATGCTAAGGAGACGTTATTAATGGAGAATATTCAACAATGCACTTCTTCTTCTAATATGGTGAATAGTATAAATGAAAATGGGAGTTATCAACTACATGAGGAAGAAAAGAGAAAGAAATTGGAGGAGAAAAGGGTTAAGAGTGGCAGAGTGAAGAAGCCAACAAAAGTGCCAAGGTTTGCGTTTCAGACAAGAAGTGTTGATGATATTTTGGACGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAACACCACATATCCCAGAAGCTACTATCGATGCACACATCACACATGCAATGTGAAGAAACAAGTGCAAAGGCTATCCAAAGATACTAGCATTGTGGTGACTACGTACGAGGGAATTCACAACCATCCATGCGAGAAGCTTATGGAAACCCTAACTCCTCTTATAAAGCAAATTCAATTTCTTGCTAGTTTGTAA 627 0.3876 MESQDPPPQNNTSSSIPFFFTPSLPNYPLESQDQGLIGDIDSWGNFFLGQSNNSLLVEDAKETLLMENIQQCTSSSNMVNSINENGSYQLHEEEKRKKLEEKRVKSGRVKKPTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNTTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLIKQIQFLASL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02861 208 SUPERFAMILY WRKY DNA-binding domain 123 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g02861 208 SMART WRKY_cls 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02861 208 ProSiteProfiles WRKY domain profile. 124 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02861 208 FunFam WRKY transcription factor 57 115 189 - -
Vivi6g02861 208 Gene3D WRKY domain 114 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g02861 208 Pfam WRKY DNA -binding domain 130 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02861 208 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 35 190 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02861 Vivi-Chr6 114648348 114649582 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02861 94 208 WRKY Transcription Factor Family AT5G41570 70.435 1.96e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi6g02861 WRKY 5.6e-25 CL0274