Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02797 ATGGCTACAGCTCCTTCGCTTCTACACTCTTCCGCCTCCCCTTTTCTCGCTCAATTTCGAACTTTTCCAACCCAATTCTCTCCCTCTTCATCACTTTCTAACAACCGGTTTGGAAGTACAGTGGTGTCCGTGAAGGCCTCGGCTTCTGGGGCTGTCTTGGTGGAGAAGTCTGAAGCAGAGAAGGTTTTTAGACTCAGAACAACTTACAAGGAGAAAATTGTTCCTTTGCTCATTGAAGAGTTCTCTTACACCAACATTCATCAGGTGCCTAAAGTTGATAAGATTGTGGTAAACTGTGGAATTGGAGAAGCTGCACAGAATGCAAAAGGTTTGGATGCGGCGATTAATGATCTAGCACTTATCACTGGGCAAAGACCTGTTAAGACTCGGGCGAGATTGGCTGTTGCCACCTTCAAGATCAGGGAAGGTCAACCACTTGGAATTGCTGTGACGTTGCGAGGAAAAATAATGTACTCATTTCTAGACCGCGTTATCAACTTAGGACTTCCTAGGACAAGAGATTTTCAAGGTGTGAATATAAGCAGCTTTGACGGGAATGGAAATTTCAACATTGGTATTAAGGACCAAACCGTGTTCCCCGAGCTGAAATCTGCTCTTGGTACACCTAGAGGAATGGACGTATGCATCTCAACAACTGCTAAAACTGATCAAGAAGGACAGAAATTACTAGCTCTCATGGGTATGCCCTTCAGAGAGGCAGTTGAAGCTACTCAAATAGTTCGCAAAAAGAAGTTGAAGTCTCATCATTTTGATGCAAAATCAAAGGGTAGAGGAGATAGAGCAAGGAAGTAA 813 0.4391 MATAPSLLHSSASPFLAQFRTFPTQFSPSSSLSNNRFGSTVVSVKASASGAVLVEKSEAEKVFRLRTTYKEKIVPLLIEEFSYTNIHQVPKVDKIVVNCGIGEAAQNAKGLDAAINDLALITGQRPVKTRARLAVATFKIREGQPLGIAVTLRGKIMYSFLDRVINLGLPRTRDFQGVNISSFDGNGNFNIGIKDQTVFPELKSALGTPRGMDVCISTTAKTDQEGQKLLALMGMPFREAVEATQIVRKKKLKSHHFDAKSKGRGDRARK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02797 270 FunFam 50S ribosomal protein L5 60 239 - -
Vivi6g02797 270 ProSitePatterns Ribosomal protein L5 signature. 118 134 IPR020929 GO:0003735|GO:0005840|GO:0006412
Vivi6g02797 270 Pfam ribosomal L5P family C-terminus 145 237 IPR031309 -
Vivi6g02797 270 SUPERFAMILY RL5-like 64 238 IPR022803 -
Vivi6g02797 270 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 66 243 IPR002132 GO:0003735|GO:0005840|GO:0006412
Vivi6g02797 270 Pfam Ribosomal protein L5 85 141 IPR031310 -
Vivi6g02797 270 Hamap 50S ribosomal protein L5 [rplE]. 62 239 IPR020930 GO:0003735|GO:0005840|GO:0006412
Vivi6g02797 270 Gene3D - 56 240 IPR022803 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02797 91 194 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 31.776 1.73e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02797 K02931 - gmx:100818896 394.045