Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02767 ATGGAAGCACTCACTCTATGTGCAGCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTAGCAGTTCAAGTTCAACCACAAGGCTATGCACCTACCATGTGTTTTTGAGTTTTAGAGGAGAAGATACTCGCAAAGGATTCACCGATCATCTATGTGCTTCCCTTGAAAGAAAAGGGATCACAACTTTCAGAGATGACAAAGATCTTGAGAGAGGCCAAGTCATTTCACAAAAGCTAATCAATGCAATTCAAGATTCTATGTTTGCCATCACTATTCTCTCACCAGACTATGCTTCTTCCACTTGGTGTTTGGATGAGCTTCAAATGATCATGGAGTGTAGCACTAGAAAGAACAACCTGCAGGGTCTTGAAGTTTTGCCAGTCTTCTATGGTGTGGACCCGTCTGATGTTCGGCATCAAAGAGGAAGCTATGAGGATGCTTTCAGAAAACATCAAGAGAAATTTGGTGAACACAGTGACAGGGTTGAAAGATGGAGAGATGCTTTAACACAAGTTGCCAGTTACTCTGGATGGGACTCCAATGGCCAGCATGAGGCATCACTAGTGGAAAACATTGCTCAACACATACATAGAAAGTTGGTTCCGAAGTTGCCATCTTGCACAGAGAGCCTTGTTGGGATTGCTTCAAAGGTGGATGAAGTGAACAAGCTCATAGGTATGCAGTTAAACGATGTGCGCTTTATAGGCATATGGGGTATGGGTGGCATAGGCAAATCGACTATTGCTAGATCTGTCTATAAAGCAATCCAAGGTGAATTTGAACTTACTTGCTTTCTTGAGAATGTTAGAGAGTTGTCTGAGAGAAAAGGTTTAGTTCACATACAAAGACAACTTCTATCTCAGCTAAATATAAGTAAGAATGATTTTCATAATTTGTATGATGGGAAAAACACAATACGAAACTCTTTATGCAGAAAAAAGGCTCTGCTTGTTCTTGATGATGTGAATGATGTAAACCAGTTGGAGAATTTAGCTGCGAAACAAGATTGGTTTGGTCCGGGAAGTAGAGTAATAATCACAACTAGAGATAAACACTTGCTAGTGACACATGGAGTACATAAAACTTATGAAGTTGGAATGCTATTTCAAAAAGAAGCCCTTAATCTCTTTTGTTTGAAAGCCTTTAAAGGAGATAAACCACAAGAAGGGTATTTGGATTTGACCAAAGAAGTGGTGGATTATACTGGTGGTCTTCCATTGGCACTTGAGGTGTTAGGTTCCTATCTCTATGGAAGAAATGTCGATGTTTGGCATAGTGCGATTAAGAAAATAAGAACTGTTCCACACCCTAGAATCCAAGATAAACTGAAAATAAGTTATGAGAGTTTAGACCCCATGGAGAAGGATATTTTTCTAGATATTGCCTGTTTCTTCAAGGGAATGAAGACAGATAAAGTAATAGATTTATTAGAATGTTACGGTTATTTCCCTCAAATTGGAATCGAAATTTTGATTGAAAGATCTTTAATAACTAAAGATTGCAGGGATGATAAACTTGATATGCATGATTTGCTTCAAGAAATGGGCAGGGATATCGTATTTCAGGAGTCTCCATATGATCCAAGCAGACGTAGTAGGTTATGGTCTCGAGACGACATTGATCATGTGTTGACAAAAAATAAGGGAACTGATGCGATTAACAGCATAGCTATGAAGTTACTTCAACCATATGAAGCATGTTGGAGCACTGAAGCATTCTTTAAGACAAGTCAGCTAAAATATCTCAGTTTATGCGAGATGCAACTTCCCCTCGGCCTCAATTGCCTCCCTAGCTCTTTGAAAGTTCTTCGCTGGAGAGGATGTCCTTTGAAAGCTTTGCCACTAACAAATCCACTCGATGAAGTTGTTAACATTAAACTATCTCATAGCAAAATTCAACAACTTTGGCAAGGAATAAAGTTTATGGAAAAGCTGAAGTACTTGAATATGGCTTTTTCCAAGAACCTAAAGAGATTGCCTGATTTTTCCGGTGTTCCAAATCTTGAAAACTTGATTCTTAAAGGATGTGCAAGCCTAAACGAAGTTCATCCGTCTCTTGTACGTCACAAGAAAGTTGTTTTGATGAATTTCGAAAACTGCAAAAGTCTTCAGTCTCTTCCAGGGAAATTGGAGATGAGTTCTCTGCAGATGTTAACTCTTTCTGGCTGTTCCGAATTTAAATTCCTTCCGGAATTCGGGGAAAACATGGAAAATCTATCATTGCTTGAGTTACAAGGAACAGCTATAAGAAAACTACCCTCATCACTTGGATCCCTAGTTGGACTTATTATGTTGAACTTAAAGGACTGCAAAAGTCTTGTTTGCATACCAGACACGATTCATGGATTGAATTCCCTCGTAACGTTGGACATTTCCGGATGTTCAAAACTTTGTAGATTGCCGGATGGTTTAAAGGAAATCAAGAGTTTGGAGGAACTCCTAGCCAATGATACTGCTATCGATGAACTACCTTCCTCCATTTTTTATCTAGATAGACTTAGAGTATTATCATTTTCCGGTTGCAAAGGTCCATTATCCAAGTCGAAGAACTGGTTTCTTCCCTTCAATTGGATGTTTGGGAGTCAACCAGATTCCACTGGATTCAGATTTCCAACTTCTGTCTCGAGTCTACCCTCTTTGAGATATATAAATCTAAGTTACTGTAACCTTTCTGACAAATCAATACCAGATTATTTCAGCCACCTATCATCGTTGCGTTCTTTGAATCTGACTGGTAACAATTTTGTTAGCATACCAAGCGCAATTTCTAAACTTCCACGACTGGATTTGCTTACTCTAAATTCCTGCCAGAAGCTACAATCATTGCCAGAGCTTGCATCAAGTATGACACAGTTGGATGCAAGCAATTGTGATTCACTGGAAACTACGAAATTTAATCCAGCAAAGCCATGTAGTCTCTTTGCATCACCTAGACGACTAAACAATGTTCAAAAACTTTTTGGCAGCTTTATTGGGGCACTTTGTCTTCCATCTGCAAGATTTGACATGCTTATCCCAGGGGAAGTAATTCCACCGTGGTTTGTACCTCAAAGAACTGTTTCCTGGGCAAAAATACAAGTTCCTAAGAATTGTCCTCTAGATGATTGGGTAGGATTTTCTCTGTGTTTTCTATTAGAGAGTTATGCTGATCCACCTGAACTTTGCAAGCATGAGATTGATTGTTATCTGTTTTCACCTAATGGTAAGCTGTTTATCAGCTCCAGAAGATTACCTCCTATGAATCCATGTCATCCTCATCTTTATATTCTCTACTTGTCCATTGATCAATTTCGCGACAGAATACTCAAAGATGATTGTTGGAATGACATTGAATTTGCACTGAAATGTTATTGCTGTCAATCACTGCAAATAGTGAGGTGTGGTTCGCGATTGGTATGTAAGCAAGATGTTGAAGATTGGAACAAAGCGAAGAGTCAGTTCAATGAGAGTTGA 3456 0.3898 MEALTLCAASSSSSSSSSSSPSSSSSTTRLCTYHVFLSFRGEDTRKGFTDHLCASLERKGITTFRDDKDLERGQVISQKLINAIQDSMFAITILSPDYASSTWCLDELQMIMECSTRKNNLQGLEVLPVFYGVDPSDVRHQRGSYEDAFRKHQEKFGEHSDRVERWRDALTQVASYSGWDSNGQHEASLVENIAQHIHRKLVPKLPSCTESLVGIASKVDEVNKLIGMQLNDVRFIGIWGMGGIGKSTIARSVYKAIQGEFELTCFLENVRELSERKGLVHIQRQLLSQLNISKNDFHNLYDGKNTIRNSLCRKKALLVLDDVNDVNQLENLAAKQDWFGPGSRVIITTRDKHLLVTHGVHKTYEVGMLFQKEALNLFCLKAFKGDKPQEGYLDLTKEVVDYTGGLPLALEVLGSYLYGRNVDVWHSAIKKIRTVPHPRIQDKLKISYESLDPMEKDIFLDIACFFKGMKTDKVIDLLECYGYFPQIGIEILIERSLITKDCRDDKLDMHDLLQEMGRDIVFQESPYDPSRRSRLWSRDDIDHVLTKNKGTDAINSIAMKLLQPYEACWSTEAFFKTSQLKYLSLCEMQLPLGLNCLPSSLKVLRWRGCPLKALPLTNPLDEVVNIKLSHSKIQQLWQGIKFMEKLKYLNMAFSKNLKRLPDFSGVPNLENLILKGCASLNEVHPSLVRHKKVVLMNFENCKSLQSLPGKLEMSSLQMLTLSGCSEFKFLPEFGENMENLSLLELQGTAIRKLPSSLGSLVGLIMLNLKDCKSLVCIPDTIHGLNSLVTLDISGCSKLCRLPDGLKEIKSLEELLANDTAIDELPSSIFYLDRLRVLSFSGCKGPLSKSKNWFLPFNWMFGSQPDSTGFRFPTSVSSLPSLRYINLSYCNLSDKSIPDYFSHLSSLRSLNLTGNNFVSIPSAISKLPRLDLLTLNSCQKLQSLPELASSMTQLDASNCDSLETTKFNPAKPCSLFASPRRLNNVQKLFGSFIGALCLPSARFDMLIPGEVIPPWFVPQRTVSWAKIQVPKNCPLDDWVGFSLCFLLESYADPPELCKHEIDCYLFSPNGKLFISSRRLPPMNPCHPHLYILYLSIDQFRDRILKDDCWNDIEFALKCYCCQSLQIVRCGSRLVCKQDVEDWNKAKSQFNES 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02767 1151 SMART till_3 32 176 IPR000157 GO:0007165
Vivi6g02767 1151 Pfam Leucine rich repeat 879 938 IPR001611 GO:0005515
Vivi6g02767 1151 Gene3D Ribonuclease Inhibitor 861 989 IPR032675 -
Vivi6g02767 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 462 IPR027417 -
Vivi6g02767 1151 Pfam C-JID domain 1006 1139 IPR045344 -
Vivi6g02767 1151 SMART LRR_typ_2 878 902 IPR003591 -
Vivi6g02767 1151 SMART LRR_typ_2 737 760 IPR003591 -
Vivi6g02767 1151 SMART LRR_typ_2 808 831 IPR003591 -
Vivi6g02767 1151 SMART LRR_typ_2 903 926 IPR003591 -
Vivi6g02767 1151 SUPERFAMILY L domain-like 871 962 - -
Vivi6g02767 1151 MobiDBLite consensus disorder prediction 1 27 - -
Vivi6g02767 1151 SUPERFAMILY L domain-like 509 843 - -
Vivi6g02767 1151 Gene3D Ribonuclease Inhibitor 560 859 IPR032675 -
Vivi6g02767 1151 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 733 IPR044974 GO:0006952
Vivi6g02767 1151 Gene3D - 369 452 IPR042197 -
Vivi6g02767 1151 Gene3D - 200 363 IPR027417 -
Vivi6g02767 1151 FunFam Disease resistance protein (TIR-NBS-LRR class) 29 202 - -
Vivi6g02767 1151 ProSiteProfiles Leucine-rich repeat profile. 905 927 IPR001611 GO:0005515
Vivi6g02767 1151 Gene3D - 25 199 IPR035897 -
Vivi6g02767 1151 PRINTS Disease resistance protein signature 782 798 - -
Vivi6g02767 1151 PRINTS Disease resistance protein signature 310 324 - -
Vivi6g02767 1151 PRINTS Disease resistance protein signature 403 417 - -
Vivi6g02767 1151 PRINTS Disease resistance protein signature 235 250 - -
Vivi6g02767 1151 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 179 IPR035897 -
Vivi6g02767 1151 ProSiteProfiles TIR domain profile. 31 201 IPR000157 GO:0007165
Vivi6g02767 1151 Pfam NB-ARC domain 223 451 IPR002182 GO:0043531
Vivi6g02767 1151 Pfam TIR domain 33 214 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02767 Vivi-Chr6 113031094 113035943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02767 763 962 WRKY Transcription Factor Family AT4G12020 32.836 3.72e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02767 - - gmx:100815486 1495.72