Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02731 ATGGCAACTGATATGCAAAGGCTGGTTGGAATGAGTGAGGATGATGGAGAAATGGGAATGGGTGTGAAAGACGAGGATGACGAGGACGAAGATTACGAGGAAAATGGAGGTGAGCATGGAAATGCTTTACAAGTGGCAGAGTTTGATGGTGGGAGTGGGATGGGAACTGGAGCTGGTGACAACAGGTTTCAGCAGCAATACGAGTTTCAAGAGCAAGTAGGCACTCCAGGTGGAGGTAATCGAAGATCTAGACCGGTAGAAGAGAAAGAGAGGACTAAGCTAAGAGAAAGGCGCCGGAGGGCTATCACTGCTCGGATCTTGGCAGGGCTTCGAAGGCATGGTAACTATAATCTTAGGGTTAGGGCTGACATAAATGATGTTATTGCTGCTCTAGCTAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGCACTACTTTTCCCTCAAAATCTCAGGGTCAGGTACCAGCTGGCGGCAGTTCTGCAGGTGTTACTTCATCATCATCCCACGTGCCTTCCCAACACCCTCCGTCTGTTTCCCTCAGAGGCGCTGCTACTGGCAATAGGACTCCTTTAGAGTACAATGCATGTCCAATGAAAGATGTTTACATTCCAGCTCCATCTCCATCCCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCTATGTTAAGGGACGGAAAAATGCAAAGAGACAATCCACCTGTGATTGGTGGTTCAATAGATACCATTAATGAGAAGCAGATTTTGGACATTCCAGCTAGATTACCAGAACGTGATTTTGCCGGGTCCCCATATGTTCCTGTTTATGTGATGCTACCATTGGGAGTGATCAATATTAAATGTGAACTTGTTGATCCGGATAGTCTACTAAAGCAGCTGAGGATGTTGAAATCAGCAAATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGAATAGTGGAAGCACATACTCCACAGGAATATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGTGAGCTTAAGCTTAAGTTGCAGGTTGTCATGTCTTTTCATGAATGTGGAGGCAATGTTGGTGATGATGTTTGTATTCCATTGCCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCAGATATTTTTTTCACTGATAGAGAGGGAAGACGCAATCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGTGTTTTGAGTGGTCGGAATGCTGTTGAGGTTTATTTTGATTTCATGAGAAGTTTCCGGATAGAGTTTGACGAGTATTTTGAGGATGGTTTTATCTCGCTTGTTGAAGTTGGACTAGGACCATGTGGAGAGCTAAGATACCCATCATGTCCAGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGGAAAGCAGCAGAAGCAAGAGGCCACACTATTTGGGCTAGAGGGCCAGATAACGTGGGTACCTATAATTCTCAGCCACACGAAACAGGTTTCTTTTGCGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTCAACTGGTATTCTCAGGCTTTAGTTGATCATGGAAACCGGGTACTCTCTTTGGCAAAATTAGCTTTTGAGGGGTCCTGCATTTCTGCAAAGCTATCAGGTATTTATTGGTGGTACAAGACTGCTAGTCATGCCGCTGAATTAACTGCTGGGTATTATAATCCATGCAATCGAGATGGCTATGCGGCAATTGTTGCAATGTTAAAGAGAAATGGAGTTAGCTTAAACATTGCTTGTGTTGACCTGCACACGGTGAATCAACATGAGAGCTTTCCAGAGCCATATGCTGACCCTGAGCGATTAGTATGGCAACTGTTGAATGCCGGGTGGGATGTTGGACTACCCGTCGTCAGTGAGAATGCACTTCCTTGCCTAAACAGAGTTGGCTATAACAATGTTTTGGATAATACCAAGCCCGTGAATGATCCAGATGGAAGGCACTTTTCATCCTTTACATACCTGAGGCTCAGTCCACTTCTTCTTGAGCGGCAAAACTTCATAGAGTTTGAACGATTTGTCAAGAGAATGCATGGAGAAGCTGTTCTGGATCTTCAGGTTTAA 2115 0.4459 MATDMQRLVGMSEDDGEMGMGVKDEDDEDEDYEENGGEHGNALQVAEFDGGSGMGTGAGDNRFQQQYEFQEQVGTPGGGNRRSRPVEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQGQVPAGGSSAGVTSSSSHVPSQHPPSVSLRGAATGNRTPLEYNACPMKDVYIPAPSPSPYDLSSSSRSQTSMLRDGKMQRDNPPVIGGSIDTINEKQILDIPARLPERDFAGSPYVPVYVMLPLGVINIKCELVDPDSLLKQLRMLKSANVDGVMVDCWWGIVEAHTPQEYNWNGYKRLFQMVRELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEIGRSNPDIFFTDREGRRNPECLSWGIDKERVLSGRNAVEVYFDFMRSFRIEFDEYFEDGFISLVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEARGHTIWARGPDNVGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSQALVDHGNRVLSLAKLAFEGSCISAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIVAMLKRNGVSLNIACVDLHTVNQHESFPEPYADPERLVWQLLNAGWDVGLPVVSENALPCLNRVGYNNVLDNTKPVNDPDGRHFSSFTYLRLSPLLLERQNFIEFERFVKRMHGEAVLDLQV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02731 704 MobiDBLite consensus disorder prediction 209 227 - -
Vivi6g02731 704 MobiDBLite consensus disorder prediction 207 234 - -
Vivi6g02731 704 Pfam Glycosyl hydrolase family 14 270 689 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 MobiDBLite consensus disorder prediction 1 96 - -
Vivi6g02731 704 PRINTS Plant beta-amylase signature 427 436 IPR001371 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Plant beta-amylase signature 685 699 IPR001371 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Plant beta-amylase signature 670 684 IPR001371 GO:0000272|GO:0016161
Vivi6g02731 704 MobiDBLite consensus disorder prediction 146 185 - -
Vivi6g02731 704 MobiDBLite consensus disorder prediction 58 77 - -
Vivi6g02731 704 MobiDBLite consensus disorder prediction 82 96 - -
Vivi6g02731 704 Gene3D Glycosidases 258 703 - -
Vivi6g02731 704 SUPERFAMILY (Trans)glycosidases 261 700 IPR017853 -
Vivi6g02731 704 MobiDBLite consensus disorder prediction 19 35 - -
Vivi6g02731 704 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 245 697 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 MobiDBLite consensus disorder prediction 146 184 - -
Vivi6g02731 704 ProSitePatterns Beta-amylase active site 1. 348 356 IPR018238 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 544 560 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 579 602 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 322 340 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 510 529 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 561 572 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 619 641 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 437 459 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 301 315 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 344 365 IPR001554 GO:0000272|GO:0016161
Vivi6g02731 704 Pfam BES1/BZR1 plant transcription factor, N-terminal 79 212 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02731 Vivi-Chr6 111977441 111983601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02731 1 701 Glycoside Hydrolase AT2G45880 64.113 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vivi6g02731 Glyco_hydro_14 2.7e-104 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02731 K01177 - gmx:100805560 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02731 6 111977441 111983601 Vivi6g02731 6 111977441 111983601 ECH