Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02699 ATGGGGGTTCAGTGCTCCAGCTTGGTACCATGTTGTGTGAATTCACAAGTTAAAACATCTGATCTTGAAGTTCTGAATGATGAAAGTGAGGATAGAAATGAGGCTAATAATGGGCCTGTGTTTCGTGAATTTACATTGGGGCAACTTAATAATGCAACGTCTGGTTTTAATATTGAGAATATAGTTTCTGAGCATGGTGAAAAGGCTCCAAACGTTGTTTATAAAGGGAAGATGGAGAATCAAACGAGAATTGTTGTTAAGAGGTTTAATAAAAGTGCTTGGCCCGATGCCCGGCAGTTTTTGGAGGAAGCTAGATCAGTTGGTCAGCTTCATAACGAAAGATTGGCAAATTTACTGGGTTGTTGTTGTGAAGGTGACGAGAGGTTGCTCGTGGCCGAATATATGCCCAATGAAACACTTGCAAAACACCTTTTCCATTGGGATGCCCATCCGATGAAATGGGCAATGCGACTCAGAGTTGTTCTTCATCTTGCAGAAGCTCTAGAGTACTGCACAAGCAATGGCCGCACCCTCTATCACGACCTTAATGCATATAGAGTTCTATTTGACGAAGATGGTAATCCCAGGCTTTCAAGTTTTGGCCTTATGAAGAATAGTAGGGATGGAAAAAGTTATAGCACAAATTTGGCATTCACCCCTCCGGAGTATCTCAGAACTGGGAGAGTAACTCCAGAAAGTGTAATATATAGCTTTGGTACTCTTTTGCTCGACCTTCTTAGTGGGAAGCATATCCCTCCAAGTCATGCCCTTGATTTGATTCGCGATAGAAATCTTCAGATGCTAACAGATTCTTGTCTGGAAGGACAATTTTCTGATGATGATGGAACTGAGTTGGTGCGCCTTGCATCTCGTTGTTTACAGTATGAACCTAGAGAGCGACCTAATACAAAGTCATTAGTGGCTGCTTTGGCTCCTCTTCAAAAAGAAACAGAGGTTCCTTCCCACTCGTTGATGGGTATCCAACATAGTGCTACTATTGTTGCTTCACTGACTCCTCTTGGCGACGCATGTTCAAGAAAGGACTTGACTGCTATACATGAAGTTCTCGAAAGTATTGGCTATAAAGATGATGAAGGCGTAGAGTTATCTTTCCAAATGTGGACGGATCAAATGCAGGACTCAATAACTAGTAAGCAAAAAGGAGACGCAGCTTTCCGACACAAAGACTTCAAACTTGCAATAGAGTGCTACACTCAGTTCATTGATGTTGGAACAATGGTTTCTCCAACTGTCCATGCACGTCGCAGCCTGTGTTATCTCATTAACAACCAACCTCAGGAAGCTATGAACGACGCAATGCAAGCACAAGTAATTTCCCCTCTATGGCACATTGCATCATATCTTCAATCTGTTTCTTTGGCCGGACTCGGAATGGCGAACGAATCTCAAGTTGCACTTTCCGAAGGAACAACACTGGAAGTCAAGCGAAATGCACATATGGGAAAAAAGTGA 1473 0.4263 MGVQCSSLVPCCVNSQVKTSDLEVLNDESEDRNEANNGPVFREFTLGQLNNATSGFNIENIVSEHGEKAPNVVYKGKMENQTRIVVKRFNKSAWPDARQFLEEARSVGQLHNERLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWDAHPMKWAMRLRVVLHLAEALEYCTSNGRTLYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNTKSLVAALAPLQKETEVPSHSLMGIQHSATIVASLTPLGDACSRKDLTAIHEVLESIGYKDDEGVELSFQMWTDQMQDSITSKQKGDAAFRHKDFKLAIECYTQFIDVGTMVSPTVHARRSLCYLINNQPQEAMNDAMQAQVISPLWHIASYLQSVSLAGLGMANESQVALSEGTTLEVKRNAHMGKK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02699 490 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Vivi6g02699 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 484 IPR045845 GO:0004672|GO:0009742
Vivi6g02699 490 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02699 490 Gene3D Tetratricopeptide repeat domain 381 489 IPR011990 GO:0005515
Vivi6g02699 490 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Vivi6g02699 490 FunFam probable serine/threonine-protein kinase At4g35230 379 488 - -
Vivi6g02699 490 SUPERFAMILY Protein kinase-like (PK-like) 38 316 IPR011009 -
Vivi6g02699 490 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Vivi6g02699 490 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Vivi6g02699 490 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Vivi6g02699 490 SUPERFAMILY TPR-like 380 476 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02699 Vivi-Chr6 111464597 111468845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02699 10 313 Glycoside Hydrolase AT3G07070 33.434 1.59e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Vivi6g02699 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02699 K14500 - gmx:100781311 842.417