Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02670 ATGAACGAGCCACCTGGTTCTCGTGCCGGTGTTGGACTTACTGGACTCACTGTCGCTAAACACTTCCGTGATGCTGAAGGACATGATGTGCTTCTTTTCATCGACAACATTTTCCGCTTTACTCAAGTATGGACAACTTATCCTGGGACCAGAAGTTGGAAGAAGCAAAGAAGGACGACAAGATTTACTCAAGATTACATGTTCGATGAAAGTGTTTGCCTCCTACTTCGGGCCAAGTGGTTCAAGCCTTTAGCTGTTGAAGAGCGTCCAGTTGTTGAAGAAGATATCTATGAGATAGAAGACTATTATTATCAGTATGAAGAAGCTGATGATGATCTAGATGACAATGAGGCTTACTATGGTGCTTCAGCAAATGTCCGGCTTGGCAACCGTAGATGGGGAGACAACAGTTTTGTAAGGGCTGGGCGTCAAGAAGCTCGGCCGGTCCATCAACCAAGCTTCCAGGATTCAGGAGAGGGGAAGAAAGGTGGAGTTACCGAACATAAATGGAGAAACGACGGTGGTCATTTTCAATGGTGTGGTGGTCGCGTCGGCTGA 558 0.4659 MNEPPGSRAGVGLTGLTVAKHFRDAEGHDVLLFIDNIFRFTQVWTTYPGTRSWKKQRRTTRFTQDYMFDESVCLLLRAKWFKPLAVEERPVVEEDIYEIEDYYYQYEEADDDLDDNEAYYGASANVRLGNRRWGDNSFVRAGRQEARPVHQPSFQDSGEGKKGGVTEHKWRNDGGHFQWCGGRVG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02670 185 Gene3D - 1 65 IPR027417 -
Vivi6g02670 185 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 64 161 - -
Vivi6g02670 185 MobiDBLite consensus disorder prediction 144 170 - -
Vivi6g02670 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 47 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02670 Vivi-Chr6 111148321 111151507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02670 63 150 C3H Transcription Factor Family AT5G12310 57.303 1.16e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02670 - - vvo:131608956 340.887