Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02642 ATGTATCTTGATATGCTTCCGACCACTTTCGGAAATACACTTTGGTTTAGTGAAGAGGAGCTTCAAGAGCTGAGAGGGACTAATTTATTTCGTGCAACTGAGTTACAGAAGAAAAGCCTGTTGAATTTGTATCAAACGAAAGTGAAGGATTTAGCGAAGAAACTTTTGGATCTTGACGGAGATTCTGAGATTGAGGTGTGCTTTGAAGATTTCCTGTGGGCAAATTCAGTTTTCTGGAGCCGTGCTTTGAATATTCCAATGCCTCGTTCTTATGTATTTCCTGAGATGCAAGATGTTCATCAAAGTTGCACTCCAGAAGCTGATGAAAAGGGAAGCGAGGTTACACAATCAGATGATCTAACCAAGGAAACGACACATAGCACAGTTCATGGAGACACCGTTTGGGTTGAGGGTCTTGTCCCTGGTATTGACTTTTGCAACCATGAGTTGAAGCCAATAGCAACATGGGAAGTTGATGGAGTTGGCTTAACAACAGGAGTTCCTGTCTCCATGTATCTTCTTTCCGCTGCTCAAAGTCCCTTGCAAATTGATCGAGAAATTTCCATTAGTTATGGCAACAAGGGAAATGAGGAACTTCTATATCTTTATGGCTTTGTCATTGATGGTAACACAGATGACTATCTCATGGTCCATTATCCAGCAGAAGCAATAAATACTATTTCTTTTTCCGAGTCTAAAGGCCAGCTTCTTGAAGTGCAGAAGGCTGAAATGAGATGTCTTTTACCCAAAACTCTGCTGGATAATGGATTTTTTCCATTGGGCACCAAAAAAAGCAGAGAAAATAACCAGTGCAACCAAGTTTGCAACTATAGTTGGAGTGGCCAACGCAAGATTCCGTCTTATGTAAACAGACTTGTTTTTCCTGAGAAATTTATGGCTACCTTAAGGACCATAGCCATGCAAGAGGATGAGCTTTTCAAGGTTTCGTCAATGCTAGAAGAGCTTGTTGGACCTGAAGGGGAAAGACAGTTATCAGATACAGATGTCCAATCTGCAATATGGGAGGTTTGCGGTGATTCCGGAGCTTTACAAGTCCTAGTTGATCTTCTTCATGTCAAGTTAATGGATCTTGAAGAGCATTCTGGAACAGAGGAAAGTGATTCTGAATTGCTCAAGAAAGCCCTTATCATTGATAGTCAGGAAGATAGCAAACAAACGGGAAATGACTCGGAGGAAACAATGGTGATGACTAGAAACAAGTGGTCTGCTGTTGTATATAGGCGAGGTCAAAAGCAGCTAACTCGATTATTCTTGAATGAAGCAGAACATGCTCTGCAGTTATCAATGAATGAAGAGATGAGTGTTCCTTGA 1332 0.4114 MYLDMLPTTFGNTLWFSEEELQELRGTNLFRATELQKKSLLNLYQTKVKDLAKKLLDLDGDSEIEVCFEDFLWANSVFWSRALNIPMPRSYVFPEMQDVHQSCTPEADEKGSEVTQSDDLTKETTHSTVHGDTVWVEGLVPGIDFCNHELKPIATWEVDGVGLTTGVPVSMYLLSAAQSPLQIDREISISYGNKGNEELLYLYGFVIDGNTDDYLMVHYPAEAINTISFSESKGQLLEVQKAEMRCLLPKTLLDNGFFPLGTKKSRENNQCNQVCNYSWSGQRKIPSYVNRLVFPEKFMATLRTIAMQEDELFKVSSMLEELVGPEGERQLSDTDVQSAIWEVCGDSGALQVLVDLLHVKLMDLEEHSGTEESDSELLKKALIIDSQEDSKQTGNDSEETMVMTRNKWSAVVYRRGQKQLTRLFLNEAEHALQLSMNEEMSVP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02642 443 Gene3D - 267 440 IPR036464 -
Vivi6g02642 443 CDD SET_LSMT 2 206 - -
Vivi6g02642 443 SUPERFAMILY SET domain 2 210 IPR046341 -
Vivi6g02642 443 MobiDBLite consensus disorder prediction 102 123 - -
Vivi6g02642 443 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 2 391 - -
Vivi6g02642 443 Pfam SET domain 2 192 IPR001214 GO:0005515
Vivi6g02642 443 Gene3D set domain protein methyltransferase, domain 1 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02642 Vivi-Chr6 110440530 110444847 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi6g02642 SET 7.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02642 - - gmx:100777394 727.243