Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02641 ATGGCGAACCCAGAAGCAAAGCTCGAAACTTTCTTGCACTGGCTTCAGGCAAATAGGGTGGAGCTACGAGGTTGCAGTATCAAGTACTGTGATTCCAGAAAAGGGTTTGGCATTTTTTCTGATAGAGATGTTTCTGATGGGATTCTGTTGGTTGTTCCACTAGAATTAGCAATTACTCCAATGAGGGTGTTGCAAGATCCTTTTCTAGGACCAGAATGTAGAGCATTGTTTGAAGAAGGAGATGTGGATGACAGATTCTTAATGATGCTGTTTTTGACTGTGGAGCGTCTGCGTAAGGGTTCTCTATGGAAGCCGTATCTTGATATGCTTCCGACCACTTTCGGAAATACACTTTGGTTTAGTGAAGAGGAGCTTCAAGAGCTGAGAGGGACTAATTTATTTCGTGCAACTGAGTTACAGAAGAAAAGCCTGTTGAATTTGTATCAAACGAAAGTGAAGGATTTAGCGAAGAAACTTTTGGATCTTGACGGAGATTCTGAGATTGAGGTGTGCTTTGAAGATTTCCTGTGGGCAAATTCAGTTTTCTGGAGCCGTGCTTTGAATATTCCAATGCCTCGTTCTTATGTATTTCCTGAGATGCAAGATGTTCATCAAAGTTGCACTCCAGAAGCTGATGAAAAGGGAAGCGAGGTTACACAATCAGATGATCTAACCAAGGAAACGACACATAGCACAGTTCATGGAGACACCGTTTGGGTTGAGGGTCTTGTCCCTGGTATTGACTTTTGCAACCATGAGTTGAAGCCAATAGCAACATGGGAAGTTGATGGAGTTGGCTTAACAACAGGAGTTCCTGTCTCCATGTATCTTCTTTCCGCTGCTCAAAGTCCCTTGCAAATTGATCGAGAAATTTCCATTAGTTATGGCAACAAGGGAAATGAGGAACTTCTATATCTTTATGGCTTTGTCATTGATGGTAACACAGATGACTATCTCATGGTCCATTATCCAGCAGAAGCAATAAATACTATTTCTTTTTCCGAGTCTAAAGGCCAGCTTCTTGAAGTGCAGAAGGCTGAAATGAGATGTCTTTTACCCAAAACTCTGCTGGATAATGGATTTTTTCCATTGGGCACCAAAAAAAGCAGAGAAAATAACCAGTGCAACCAAGTTTGCAACTATAGTTGGAGTGGCCAACGCAAGATTCCGTCTTATGTAAACAGACTTGTTTTTCCTGAGAAATTTATGGCTACCTTAAGGACCATAGCCATGCAAGAGGATGAGCTTTTCAAGGTTTCGTCAATGCTAGAAGAGCTTGTTGGACCTGAAGGGGAAAGACAGTTATCAGATACAGATGTCCAATCTGCAATATGGGAGGTTTGCGGTGATTCCGGAGCTTTACAAGTCCTAGTTGATCTTCTTCATGTCAAGTTAATGGATCTTGAAGAGCATTCTGGAACAGAGGAAAGTGATTCTGAATTGCTCAAGAAAGCCCTTATCATTGATAGTCAGGAAGATAGCAAACAAACGGGAAATGACTCGGAGGAAACAATGGTGATGACTAGAAACAAGTGGTCTGCTGTTGTATATAGGCGAGGTCAAAAGCAGCTAACTCGATTATTCTTGAATGAAGCAGAACATGCTCTGCAGTTATCAATGAATGAAGAGATGAGTGTTCCTTGA 1644 0.4167 MANPEAKLETFLHWLQANRVELRGCSIKYCDSRKGFGIFSDRDVSDGILLVVPLELAITPMRVLQDPFLGPECRALFEEGDVDDRFLMMLFLTVERLRKGSLWKPYLDMLPTTFGNTLWFSEEELQELRGTNLFRATELQKKSLLNLYQTKVKDLAKKLLDLDGDSEIEVCFEDFLWANSVFWSRALNIPMPRSYVFPEMQDVHQSCTPEADEKGSEVTQSDDLTKETTHSTVHGDTVWVEGLVPGIDFCNHELKPIATWEVDGVGLTTGVPVSMYLLSAAQSPLQIDREISISYGNKGNEELLYLYGFVIDGNTDDYLMVHYPAEAINTISFSESKGQLLEVQKAEMRCLLPKTLLDNGFFPLGTKKSRENNQCNQVCNYSWSGQRKIPSYVNRLVFPEKFMATLRTIAMQEDELFKVSSMLEELVGPEGERQLSDTDVQSAIWEVCGDSGALQVLVDLLHVKLMDLEEHSGTEESDSELLKKALIIDSQEDSKQTGNDSEETMVMTRNKWSAVVYRRGQKQLTRLFLNEAEHALQLSMNEEMSVP 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02641 547 Pfam SET domain 35 296 IPR001214 GO:0005515
Vivi6g02641 547 Gene3D set domain protein methyltransferase, domain 1 5 310 - -
Vivi6g02641 547 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 495 - -
Vivi6g02641 547 SUPERFAMILY SET domain 7 314 IPR046341 -
Vivi6g02641 547 CDD SET_LSMT 31 310 - -
Vivi6g02641 547 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02641 Vivi-Chr6 110440530 110445378 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi6g02641 SET 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02641 - - gmx:100777394 900.968