Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02631 ATGGAGGAAGATGGTGTTGATGCAAGTTGTTCAATAGAAGATTGGTTGGTACATGTAGAGGAACTTGTTCCTATAGCTCTTGGTAAAGCAGAAGAGGTTAAGGTTAAGGTTAAAGGTTTTTCTGCTAGATGGAAGATGATCATATCTAGATTAGAACAGATTCCGTTGATGTTATCGAATTTATCTAGTCATCCGTGTTTCTCGAAGAATGCTCTTTGCAAGGAGCAGTTGCAGGCTGTTTCGAGTTTGCTCAGAGACGCGATTGAATCAGCTGAGTTGTGTTTGAAGGAGAAATATGAAGGTAAGCTTCAGATGCAGAGTGATCTGGACGCGTTGATTGGGAGAATGGATTTGAATTTACGAGATTGTGGACTTTTGATCAAAACTGGTATGCTTGGCGAGGCTACTGCGTCGTCCGTGTCTGGTTCTGTCGAACAATCAGATGCTGCAGCACATAATAACATAAGGGAGTTACTCGCGCGGCTTCAGATCGGTCATTTGGAATCGAAGCACAAAGCTTTGGATTGTGTTGTTGAGGTTATGAAAGAAGATGAAAAGAATGTTTTGGATGTTTTGAGCAGGAGCAACATTTCTGCATTGGTTCAATTGCTTACAGCATCATCAACAAGGATAAGGGAGAAAACAGTTACTGTTATATGCTCGCTCGTCGAATCAGGTAGCTGCGAGGATTGGTTAGTTTCCGAAGGCGTTCTTCCGCCTCTTATAAGACTCGTTGAATCAGGCAGTGCTGTAGGTAGAGAAAAGGCTGCGATATCGCTTCAGAGGCTATCTATGTCGGCTGATACGTCACGTGAAATAGTCGGACACGGAGGCGTTTGTCCGCTGATCGAGCTCTGTCGAACCGGAGATTCTGTTTCGCAGGCTGCTGCAGCTTGTACATTAAAGAACATATCAGCTGTTCCTGAGGTGAGACAAGTTTTAGCCGAGGAAGGGATTGTTAAGGTTATGATCAATCTGTTAGCCTCTGGAATGTTGTTAGGCTCCAAAGAATATGCAGCAGAATGTTTGCAGAATCTCACTGCAAGCAACGAAAGCCTAAAAAGAAGCGTTGTATCCGAAGGCGGTGTTAGGACTCTTTTATCCTATCTCGACGGTCCACTTCCTCAAGAATCCGCTGTCGCTGCATTGAGAAATTTAATCGGATCGGTTTCTGAGGAAACATTGGTTTCGTTAGGACTACTTCCGCGTTTGGTCCACGTCCTAAAATCCGGATCCTCGGGAGCGCAACAGGCCGCTGCATCAGCAATCTGCAGAGTTAGCAGCTCGACCGAGATGAAAAAATCGGTCGGCGAATCCGGCTGCATTCCTCTCCTAGTTAAGATGCTTGAAGCTAAACCAAACAGTGCAAGAGAAGTTGCTGCACAAGCATTATCATGCTTGATGACAGTGTCTTATAACAGAAGAGAAGTTAAAAAAGATGATAAAAGTGTGCCTAATTTGGTTCAGTTGCTTGATCCTAGTCCACAAAACAATGCAAAAAAATATGCAGTTCTTTGCCTAGGATTGATTTCTTCAAGTAAGAAATGTAAGAAGCTAATGATCTCATATGGTGCTATTGGATATTTGAAGAAACTTAATGAGATGGATATTCCAGGTGCTAAAAAGTTACATGAGAGATTAGAAAAAGGAAAGTTGAGAGGTTTGTTTGGTAAGAAAATAGTGTAA 1686 0.4282 MEEDGVDASCSIEDWLVHVEELVPIALGKAEEVKVKVKGFSARWKMIISRLEQIPLMLSNLSSHPCFSKNALCKEQLQAVSSLLRDAIESAELCLKEKYEGKLQMQSDLDALIGRMDLNLRDCGLLIKTGMLGEATASSVSGSVEQSDAAAHNNIRELLARLQIGHLESKHKALDCVVEVMKEDEKNVLDVLSRSNISALVQLLTASSTRIREKTVTVICSLVESGSCEDWLVSEGVLPPLIRLVESGSAVGREKAAISLQRLSMSADTSREIVGHGGVCPLIELCRTGDSVSQAAAACTLKNISAVPEVRQVLAEEGIVKVMINLLASGMLLGSKEYAAECLQNLTASNESLKRSVVSEGGVRTLLSYLDGPLPQESAVAALRNLIGSVSEETLVSLGLLPRLVHVLKSGSSGAQQAAASAICRVSSSTEMKKSVGESGCIPLLVKMLEAKPNSAREVAAQALSCLMTVSYNRREVKKDDKSVPNLVQLLDPSPQNNAKKYAVLCLGLISSSKKCKKLMISYGAIGYLKKLNEMDIPGAKKLHERLEKGKLRGLFGKKIV 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02631 561 Gene3D - 251 376 IPR011989 -
Vivi6g02631 561 SUPERFAMILY ARM repeat 155 532 IPR016024 -
Vivi6g02631 561 SMART arm_5 349 388 IPR000225 GO:0005515
Vivi6g02631 561 SMART arm_5 266 306 IPR000225 GO:0005515
Vivi6g02631 561 SMART arm_5 389 428 IPR000225 GO:0005515
Vivi6g02631 561 SMART arm_5 184 224 IPR000225 GO:0005515
Vivi6g02631 561 SMART arm_5 429 469 IPR000225 GO:0005515
Vivi6g02631 561 SMART arm_5 470 512 IPR000225 GO:0005515
Vivi6g02631 561 SMART arm_5 307 348 IPR000225 GO:0005515
Vivi6g02631 561 Pfam Armadillo/beta-catenin-like repeat 271 306 IPR000225 GO:0005515
Vivi6g02631 561 Gene3D - 154 250 IPR011989 -
Vivi6g02631 561 Gene3D - 377 539 IPR011989 -
Vivi6g02631 561 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02631 Vivi-Chr6 110320236 110323119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02631 164 465 U-box Gene Family AT3G54790 28.889 1.09e-17 85.1