Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02604 ATGTACCTTGATATGCTTCCAACCACTTTCGGAAATACACTTTGGTTTAGTGAAGAGGAACTTCGAGAGCTGAAAGGGACTAATTTATATCGTGCAACTGAGTTACAGAAGAAAAGCTTGTTGAATTTGTATGAAACGAAAGTGAAGGATTTAGCGAAGAAACTTTTGGACCTTGACGGAGATTCTGAGATTGAGGTGTGCTTTGAAGATTTCCTGTGGGCAAATTCAGTTTTCTGGAGCCGTGCTTTGAATATTCCAATGCCTCGCTCTTATGTATTTCCTGAGATGCAAGATGTTCATCAGAGTTGCACTCCAGAAGCTGATGAAAAGGGAAGCGAGGTTACACAATCAGATGATCTAACCAAGGAAACGACACATAGCACAGTTCATGGAGACACCGTTTGGGTTGAGGGTCTTGTCCCTGGTATTGACTTTTGCAACCATGAGTTGAAGCCAATAGCAACATGGGAAGTTGATGGAGTTGGCTTAACAACAGGAGTTCCTGTCTCCATGTATCTTCTTTCCGCTGCTCAAAGTCCCTTGCAAATTGATCGAGAAATTTCCATTAGTTATGGCAACAAGGGAAATGAGGAACTTCTATATCTTTATGGCTTTGTCATTGATGGTAACACAGATGACTACCTCATGGTCCATTATCCAGCAGAAGCAATAAATACTCTTCCTTTTTCAGAGTCAAAAGCCCAGCTTCTTGAAGTGCAGAAAGCTGAAATGAGATGTCTTTTACCCCAAACTCTGCTGGATAATGGATTTTTTCCATTACGCACCAAAGACAGCGGAGAAAAAGAAAATAACCAGTGCAACAAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGATTCCATCATATGTAAACAAACTTGTTTTTCCTGAGAAATTTATGGCTACCTTAAGGACGATAGCCATGCAAGAGGATGAGCTTTTCAAGGTTTCCTCAATGCTAGAAGAGCTTGTTGGACCTGAAGGGGAAAGACAGTTATCAGATACAGATGTTCAATCTGCAATATGGGAAGTTTGCGGTGATTCCGGAGCTTTACAAGTCCTAGTTGATCTTCTTCATGTCAAGTTAATGGATCTTGAAGAGCATTCTGGAACAGAGGAAAGTGATTCTGCATTGCTCAAGAAAGCCCTTATCATTGATAGTCAGGAAGATAGCAAACAAATTGGAAATGACTCGGAGGAAACAAATATGATGAGTAGAAACAAATGGTCTGCTATTGTATATAGGCGAGGTCAAAAGCAGCTAACTCGATTATTCTTGAATGAAGCAGAACATGCTCTGCAATTATCAATGAATGAAGAGATGAGTGTTCCTTGA 1338 0.4058 MYLDMLPTTFGNTLWFSEEELRELKGTNLYRATELQKKSLLNLYETKVKDLAKKLLDLDGDSEIEVCFEDFLWANSVFWSRALNIPMPRSYVFPEMQDVHQSCTPEADEKGSEVTQSDDLTKETTHSTVHGDTVWVEGLVPGIDFCNHELKPIATWEVDGVGLTTGVPVSMYLLSAAQSPLQIDREISISYGNKGNEELLYLYGFVIDGNTDDYLMVHYPAEAINTLPFSESKAQLLEVQKAEMRCLLPQTLLDNGFFPLRTKDSGEKENNQCNKVCNYSWSGQRKIPSYVNKLVFPEKFMATLRTIAMQEDELFKVSSMLEELVGPEGERQLSDTDVQSAIWEVCGDSGALQVLVDLLHVKLMDLEEHSGTEESDSALLKKALIIDSQEDSKQIGNDSEETNMMSRNKWSAIVYRRGQKQLTRLFLNEAEHALQLSMNEEMSVP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02604 445 SUPERFAMILY SET domain 2 210 IPR046341 -
Vivi6g02604 445 Gene3D - 221 442 IPR036464 -
Vivi6g02604 445 Pfam SET domain 2 192 IPR001214 GO:0005515
Vivi6g02604 445 CDD SET_LSMT 2 206 - -
Vivi6g02604 445 MobiDBLite consensus disorder prediction 102 124 - -
Vivi6g02604 445 Gene3D set domain protein methyltransferase, domain 1 1 206 - -
Vivi6g02604 445 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 2 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02604 Vivi-Chr6 109939993 109943675 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi6g02604 SET 3.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02604 - - gmx:100777394 720.309