Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02603 ATGGCGAACCCAGAATCAAAGCTCGAAACTTTCTTGCACTGGCTTCAGGCAAATAGGGTGGAGCTACGAGGTTGCAGTATCAAGTACTGTGATTCCAGAAAAGGGTTTGGCATTTTTTCTGATAAAGATGTTTCTGATGGGATTCTGTTGGTTGTTCCACTAGAATTAGCAATTACTCCCATGAGGGTGTTGCAAGACCCTTTTCTAGGACCAGAGTGTAGAGCATTGTTTGAAGAAGGAGATGTGGATGACAGATTCTTAATGATGCTGTTTTTGACTGTGGAGCGTCTGCGTAAGGGTTCTCTATGGAAGCCGTACCTTGATATGCTTCCAACCACTTTCGGAAATACACTTTGGTTTAGTGAAGAGGAACTTCGAGAGCTGAAAGGGACTAATTTATATCGTGCAACTGAGTTACAGAAGAAAAGCTTGTTGAATTTGTATGAAACGAAAGTGAAGGATTTAGCGAAGAAACTTTTGGACCTTGACGGAGATTCTGAGATTGAGGTGTGCTTTGAAGATTTCCTGTGGGCAAATTCAGTTTTCTGGAGCCGTGCTTTGAATATTCCAATGCCTCGCTCTTATGTATTTCCTGAGATGCAAGATGTTCATCAGAGTTGCACTCCAGAAGCTGATGAAAAGGGAAGCGAGGTTACACAATCAGATGATCTAACCAAGGAAACGACACATAGCACAGTTCATGGAGACACCGTTTGGGTTGAGGGTCTTGTCCCTGGTATTGACTTTTGCAACCATGAGTTGAAGCCAATAGCAACATGGGAAGTTGATGGAGTTGGCTTAACAACAGGAGTTCCTGTCTCCATGTATCTTCTTTCCGCTGCTCAAAGTCCCTTGCAAATTGATCGAGAAATTTCCATTAGTTATGGCAACAAGGGAAATGAGGAACTTCTATATCTTTATGGCTTTGTCATTGATGGTAACACAGATGACTACCTCATGGTCCATTATCCAGCAGAAGCAATAAATACTCTTCCTTTTTCAGAGTCAAAAGCCCAGCTTCTTGAAGTGCAGAAAGCTGAAATGAGATGTCTTTTACCCCAAACTCTGCTGGATAATGGATTTTTTCCATTACGCACCAAAGACAGCGGAGAAAAAGAAAATAACCAGTGCAACAAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGATTCCATCATATGTAAACAAACTTGTTTTTCCTGAGAAATTTATGGCTACCTTAAGGACGATAGCCATGCAAGAGGATGAGCTTTTCAAGGTTTCCTCAATGCTAGAAGAGCTTGTTGGACCTGAAGGGGAAAGACAGTTATCAGATACAGATGTTCAATCTGCAATATGGGAAGTTTGCGGTGATTCCGGAGCTTTACAAGTCCTAGTTGATCTTCTTCATGTCAAGTTAATGGATCTTGAAGAGCATTCTGGAACAGAGGAAAGTGATTCTGCATTGCTCAAGAAAGCCCTTATCATTGATAGTCAGGAAGATAGCAAACAAATTGGAAATGACTCGGAGGAAACAAATATGATGAGTAGAAACAAATGGTCTGCTATTGTATATAGGCGAGGTCAAAAGCAGCTAACTCGATTATTCTTGAATGAAGCAGAACATGCTCTGCAATTATCAATGAATGAAGAGATGAGTGTTCCTTGA 1650 0.4127 MANPESKLETFLHWLQANRVELRGCSIKYCDSRKGFGIFSDKDVSDGILLVVPLELAITPMRVLQDPFLGPECRALFEEGDVDDRFLMMLFLTVERLRKGSLWKPYLDMLPTTFGNTLWFSEEELRELKGTNLYRATELQKKSLLNLYETKVKDLAKKLLDLDGDSEIEVCFEDFLWANSVFWSRALNIPMPRSYVFPEMQDVHQSCTPEADEKGSEVTQSDDLTKETTHSTVHGDTVWVEGLVPGIDFCNHELKPIATWEVDGVGLTTGVPVSMYLLSAAQSPLQIDREISISYGNKGNEELLYLYGFVIDGNTDDYLMVHYPAEAINTLPFSESKAQLLEVQKAEMRCLLPQTLLDNGFFPLRTKDSGEKENNQCNKVCNYSWSGQRKIPSYVNKLVFPEKFMATLRTIAMQEDELFKVSSMLEELVGPEGERQLSDTDVQSAIWEVCGDSGALQVLVDLLHVKLMDLEEHSGTEESDSALLKKALIIDSQEDSKQIGNDSEETNMMSRNKWSAIVYRRGQKQLTRLFLNEAEHALQLSMNEEMSVP 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02603 549 Pfam SET domain 35 296 IPR001214 GO:0005515
Vivi6g02603 549 Gene3D - 328 546 IPR036464 -
Vivi6g02603 549 MobiDBLite consensus disorder prediction 207 228 - -
Vivi6g02603 549 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 500 - -
Vivi6g02603 549 Gene3D set domain protein methyltransferase, domain 1 4 310 - -
Vivi6g02603 549 CDD SET_LSMT 31 310 - -
Vivi6g02603 549 SUPERFAMILY SET domain 7 314 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02603 Vivi-Chr6 109939993 109944185 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi6g02603 SET 7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02603 - - gmx:100777394 894.034