Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02593 ATGGAGGAAGATGGTGCTGATGCAAGTTGTTCAATAGAAGATTGGTTGTTACATGTAGAGGAACTTGTTCCTATAGCTCTTGATAAAGCAGAAGAGGTTAAGGTTAAGGTTAAGGTTAAAGGTTTTTCTGGTAGATGGAAGATGATCATATCTAGATTAGAACAGATTCCGTTGATGTTATCGAATTTATCGAGTCATCCGTGTTTTTCGAAGAATGCTCTTTGCAAGGAGCAGTTGCAGGCTGTGTCGAGTTTGCTCAGAGACGTGATTGATTCGGCTGAGTTGTGTTTGAAGGAGAAATATGAAGGTAAGCTTCAGATGCAGAGTGATCTGGACGCGTTGATTGGGAGAATGGATTTGAATTTACGAGATTGTGGACTTTTGATCAAAACTGGTATGCTTGGCGAGGCTACTGCGTCGTCCGTGTCTGGTTCTGTGGAACAATCAGATGCTGCAGCACATAATAACATAAGGGAGTTACTCGCGCGGCTTCAGATCGGTCATTTGGAATCGAAGCACAAAGCTTTGGATTGTGTTGTTGAGGTTATGAAAGAAGATGAAAAGAATGTTTTGGATGTTTTGAGCAGGAGCAACATTTCTGCATTGGTTCAATTGCTTACAGCATCATCAACTAGGATAAGGGAGAAAACAGTTACTGTTATATGCTCGCTCGTCGAATCAGGTAGCTGCGAGGATTGGCTAGTTTCCGAAGGGGTTCTTCCGCCTCTTATAAGACTCGTCGAATCAGGCAGTCCTGTAGGTAGAGAAAAGGCCGCGATATCGCTGCAGAGGCTATCAATGTCGGCTGATACGTCACGTGAAATAGTTGGACACGGAGGCATTTGTCCGTTGATCGAGCTTTGTCGAACCGGAGATTCTGTTTCTCAGGCTGCTGCAGCTTGTACATTAAAGAACATATCAGCAGTTCCTGAGGTGAGACAAGTTTTAGCCGAGGAAGGGATTGTTAAGGTTATGATCAATCTGTTAGCCTCTGGAATGTTGTTAGGCTCCAAAGAATATGCAGCAGAATGTTTGCAGAATCTCACTGCAAGCAACGAAAGCCTAAAGAGATCTGTCGTATCCGAAGGCGGTGTTAGGACTCTTTTAGCCTATCTCGACGGTCCACTTCCTCAAGAATCCGCTGTCGGGGCGTTGAGAAATTTAATCGGATCGGTTTCCGAGGAAACACTGGTTTCGTTAGGACTACTTCCGCGTTTGGTCCACGTCCTAAAATCCGGATCCTCGGGAGCGCAACAGGCCGCTGCATCAGCAATCTGCAGAGTTAGCAGCTCGACCGAGATGAAGAAATCGGTCGGCGAATCCGGCTGCATTCCTCTCCTTGTAAAGATGCTTGAAGCTAAACCAAACAGTGCAAGAGAAGTTGCTGCACAAGCATTATCATGCTTGATGACAGTGTCTTATAACAGAAGAGAAGTTAAAAAAGATGATAAAAGTGTGCCTAATTTGGTTCAGTTGCTTGATCCTAGTCCACAAAACAATGCAAAAAAATATGCAGTTCTTTGCCTAGGATTGATTTCTTCAAGTAAGAAATGTAAGAAGCTAATGATCTCTTATGGTGCTATTGGATATTTGAAGAAACTTAATGAGATGGATATTCCAGGAGCTAAAAAGTTACATGAGAGATTAGAAAAAGGAAAGTTGAGAGGTTTGTTTGGAAAGAAAATAGTGTAA 1692 0.4314 MEEDGADASCSIEDWLLHVEELVPIALDKAEEVKVKVKVKGFSGRWKMIISRLEQIPLMLSNLSSHPCFSKNALCKEQLQAVSSLLRDVIDSAELCLKEKYEGKLQMQSDLDALIGRMDLNLRDCGLLIKTGMLGEATASSVSGSVEQSDAAAHNNIRELLARLQIGHLESKHKALDCVVEVMKEDEKNVLDVLSRSNISALVQLLTASSTRIREKTVTVICSLVESGSCEDWLVSEGVLPPLIRLVESGSPVGREKAAISLQRLSMSADTSREIVGHGGICPLIELCRTGDSVSQAAAACTLKNISAVPEVRQVLAEEGIVKVMINLLASGMLLGSKEYAAECLQNLTASNESLKRSVVSEGGVRTLLAYLDGPLPQESAVGALRNLIGSVSEETLVSLGLLPRLVHVLKSGSSGAQQAAASAICRVSSSTEMKKSVGESGCIPLLVKMLEAKPNSAREVAAQALSCLMTVSYNRREVKKDDKSVPNLVQLLDPSPQNNAKKYAVLCLGLISSSKKCKKLMISYGAIGYLKKLNEMDIPGAKKLHERLEKGKLRGLFGKKIV 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02593 563 SUPERFAMILY ARM repeat 157 534 IPR016024 -
Vivi6g02593 563 Gene3D - 334 543 IPR011989 -
Vivi6g02593 563 SMART arm_5 351 390 IPR000225 GO:0005515
Vivi6g02593 563 SMART arm_5 431 471 IPR000225 GO:0005515
Vivi6g02593 563 SMART arm_5 309 350 IPR000225 GO:0005515
Vivi6g02593 563 SMART arm_5 391 430 IPR000225 GO:0005515
Vivi6g02593 563 SMART arm_5 186 226 IPR000225 GO:0005515
Vivi6g02593 563 SMART arm_5 472 514 IPR000225 GO:0005515
Vivi6g02593 563 SMART arm_5 268 308 IPR000225 GO:0005515
Vivi6g02593 563 Gene3D - 134 332 IPR011989 -
Vivi6g02593 563 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02593 Vivi-Chr6 109779187 109781466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02593 166 467 U-box Gene Family AT3G54790 28.889 2.16e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02593 - - gmx:100789140 853.588