Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02584 ATGAGTTTTGGTGACAATAAGCCAGGTTGTGGTGAAAGTGCTAAATTCATAGCAGAAGCAGATATTAATGCTTTTAGCAACGGAACAAACCATAGCAGCAACAACAACAACAGTAGAATAATAATGCCTTCTGGTGCAATCTCACAACAACCTCGTTTATCATCTCCTACTTTGGTTAAATCCATGTTCAACTCACCTGGCCTATCTTTAGCACTTCAAACAAATGGTTTGAGAAGGAGTAGAGAAGAAGAAGATGAACATGAAAGCAGATCTGGTGGTAGTGAGAACATGGATGGTGTTTCTGGTGATGACTTTGATGCTGCCGACAATCCACCAAGAAAAAAACGTTATCACCGACACACTCCTCAACAAATTCAAGAACTTGAATCGATGTTTAAGGAGTGTCCTCATCCTGATGAAAAACAAAGACTTGAACTCAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTTAAATTTTGGTTCCAAAATAGAAGAACACAAATGAAGACTCAATTGGAACGCCATGATAATTCACTACTTAGGCAAGCAAACGATAAGCTAAGAGCTGAGAACATGTCAATAAGAGAAGCATTGAGGAATCCAATGTGTTCAAATTGCGGCGAACCAGCTATCATCAATGAAATATCACTTGAAGAACAACATCTAAGATTCGAAAACGCGAGATTAAAAGACGAGCTCGACCGAGTTTGTACGCTCGCCGGCAAGTTTTTAGGCCGGCCGATTACGTCGTTACCAAACTCAAGTTTAGACACCGGTTTCGTTTGTTTGAACCATAATACTCTACCTTCAACATTGCCTTTAGAACAAGATTTTGGTATATCAATGGAGAGATCTATGGTAACAAATAGTAGTAATGGAAATGGTTTTGATAGATCAATGGAGAGATCTATGTTTCTTGAACTTGCTTTATCTGCAATGGATGAGTTAGTGAAAATGGCTCAAACTAATGAGCCTCTTTGGATTAGAAGCGATGAAAGTGGAAGAGAGATTCTTAACCATGAGGAGTTTTCAAGAACAGTTAGTACTTCTTGTATTGGTTTGAAACCTAATGGTTATGTTTCTGAGGCTTCTAGAGAAAGTGGTGTTGTTATCATAAACAGCCTGGCTCTTGTTGAAACTTTAATGGATTCAAATCGATGGTCAGAGATGTTTCCTTGTGTGATTGCAAGAGCTTCCACAAGTGAAGTGATATCTAATGGAATAAATGGAACTAGAAATGGTGCTCTTCAACTGATGCAAGCTGAACTTCAAGTACTTTCTCCGTTGGTTCCAGTTAGAGAAGTGAATTTTCTACGATTTTGCAAGCAACATGCAGAAGGGGTATGGGCAGTGGTTGATGTGTCGATAGATACCTTCAGAGAAGCTTCTTCTGGCGGTGCACCTACTTTTCATAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCTGAATACGAAGAAAACGATGTTCACGAGCTCTACAAGCCCTTTCTAAGCTTAGGCATGGGGTTTGGCGCACAACGATGGGTTGCAACCCTCCAACGCCAATGCGAATGCCTAGCTATCTTAATGTCATCAGCACTCCCCACTAGAGAACAATCAGCAATTAGCGCGGGAGGAAGGCGTAGCATGCTAAAGCTAGCGCAACGAATGACAAACAACTTTTGCGCGGGAGTTTGTGCATCAACAATACACAAATGGAACAAGCTAAACGCAGGAAACATGGGCGAAAACATTAGGGTCATGACACGGAAGAGTGTCAATGATCCAGGTGAACCATCGGGGGTTGTGCTAAGCGCGGCAACCTCCGTTTGGCTTCCTGTTTCTCCCCAAAGAGTCTTCAATTTTCTTCGCAACGAGGAACTCAGAAGCGAGTGGGACATACTCTCCAATGGTGGACCAATGCAAGAAATGGCTCACATTGCCAAAGGACATGACCATGGCAATAGTGTCTCCCTCCTAAGAGCTAGTGCTATTAATTCAAATCAGAGTAGCATGCTGATTTTACAGGAAACATGCACAGACGCGTCGGGGTCGCTTGTTGTGTACGCGCCGGTGGATATTCCCGCAATGCATGTGGTAATGAACGGCGGCGACTCTGCTTACGTTGCGTTACTTCCGTCGGGTTTTGCTGTGTTACCAGATGGACGTATTGACGGGAGTGATAATCACGGCGGCGCGTCGCGGCAGAGAGAGGGTGGATCTCTTTTGACAGTGGCGTTTCAGATACTTGTGAATAGTCTTCCCACGGCGAAGCTGACGGTGGAATCAGTGGAGACGGTGAATAATCTTATTTCTTGTACTGTTCAGAAGATAAAAGCAGCACTTCAGTGTGAGAGTTGA 2388 0.4317 MSFGDNKPGCGESAKFIAEADINAFSNGTNHSSNNNNSRIIMPSGAISQQPRLSSPTLVKSMFNSPGLSLALQTNGLRRSREEEDEHESRSGGSENMDGVSGDDFDAADNPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHDNSLLRQANDKLRAENMSIREALRNPMCSNCGEPAIINEISLEEQHLRFENARLKDELDRVCTLAGKFLGRPITSLPNSSLDTGFVCLNHNTLPSTLPLEQDFGISMERSMVTNSSNGNGFDRSMERSMFLELALSAMDELVKMAQTNEPLWIRSDESGREILNHEEFSRTVSTSCIGLKPNGYVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARASTSEVISNGINGTRNGALQLMQAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTFREASSGGAPTFHNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEENDVHELYKPFLSLGMGFGAQRWVATLQRQCECLAILMSSALPTREQSAISAGGRRSMLKLAQRMTNNFCAGVCASTIHKWNKLNAGNMGENIRVMTRKSVNDPGEPSGVVLSAATSVWLPVSPQRVFNFLRNEELRSEWDILSNGGPMQEMAHIAKGHDHGNSVSLLRASAINSNQSSMLILQETCTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVLPDGRIDGSDNHGGASRQREGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02584 795 ProSiteProfiles START domain profile. 298 537 IPR002913 GO:0008289
Vivi6g02584 795 ProSiteProfiles 'Homeobox' domain profile. 111 171 IPR001356 GO:0003677
Vivi6g02584 795 MobiDBLite consensus disorder prediction 77 93 - -
Vivi6g02584 795 FunFam Homeobox-leucine zipper protein HDG1 101 187 - -
Vivi6g02584 795 SMART START_1 307 534 IPR002913 GO:0008289
Vivi6g02584 795 Pfam Homeodomain 114 169 IPR001356 GO:0003677
Vivi6g02584 795 CDD START_ArGLABRA2_like 302 533 - -
Vivi6g02584 795 FunFam Homeobox-leucine zipper protein GLABRA 2 307 533 - -
Vivi6g02584 795 MobiDBLite consensus disorder prediction 70 121 - -
Vivi6g02584 795 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 110 792 IPR042160 -
Vivi6g02584 795 SUPERFAMILY Bet v1-like 562 788 - -
Vivi6g02584 795 Pfam START domain 307 534 IPR002913 GO:0008289
Vivi6g02584 795 Coils Coil 180 200 - -
Vivi6g02584 795 SMART HOX_1 112 175 IPR001356 GO:0003677
Vivi6g02584 795 Gene3D - 102 187 - -
Vivi6g02584 795 SUPERFAMILY Homeodomain-like 97 171 IPR009057 -
Vivi6g02584 795 CDD homeodomain 113 171 IPR001356 GO:0003677
Vivi6g02584 795 SUPERFAMILY Bet v1-like 299 534 - -
Vivi6g02584 795 ProSitePatterns 'Homeobox' domain signature. 146 169 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02584 Vivi-Chr6 109598418 109603503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02584 63 795 Homeobox Transcription Factor Family AT3G61150 65.540 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Vivi6g02584 START 9.4e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02584 K09338 - gmx:100783614 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02584 6 109598418 109603503 Vivi6g02584 6 109598418 109603503 ECH