Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02575 ATGTCCAACATAGGCTTTATGATGTTTAGGAGAGTCTTTTTATTCATGGCTCTTATGGCGACGAATTCAATCGCGCTCGCGGCGCAACAGACGTATATAGTCCACATGGACAAGACCAAAATTGAAGGCTCAATTCATTCTCAAGACAGCACAAAAACATGGTCTGAATCAGTCATTGATTTCATTACTCAAGCTTCAATGGAGGGAGAAGAGCTAGAAGATATTCTATCACCTCAGCTTCTATATGCCTATGAAACTAACATGTTTGGTTTTGCAGCCACACTTTCTGAGAAACAGCTTGAACACTTAAGGCAAATTGATGGTTTTCTATCAGTCATTCCTGATGAACTATCAACACTCGATACGACACATACACCAAGTTTTCTTGGCCTAACTAATGGAAAAGGACTTTGGAGTGCTCCGAGTTTGGCCTCAGATGTGATCATTGGTGTCCTTGATTCGGGAATATGGCCCGAACATGTCAGTTTCAAAGACTCGGGCTTTTCCCCGATCCCCCGTAAATGGAAAGGTGTTTGTCAACAAGGCACAAAATTCACATCCTTAAATTGTAACAAGAAGCTTATTGGTGCAAGATACTATTACAAAGGGTACGAAAAATTCATCGGGAAAATCAATGAAACAACCGATTATCTTTCTGCTAGAGACACTCAAGGCCATGGAACTCACACTGCCTCGACCGCAGCCGGTAATGTGGTTCAAAATGCAAACATTTTTGGACTTGCTAAAGGCTCAGCCACTGGAATGAGGCGTACATCAAGAATCGCGGCTTATAAAGTTTGCTGGCTCTCTGGCTGCGCGAATTCCGACCTATTAGCAGCCATGGACCAAGCAGTTTCCGACGGTGTTGATGTACTTTCCCTCTCTTTAGGAAGTATTCCAAAACCATTTTATAATGATAGCATTGCTATAGCTTCATTCGGAGCAACAAAAAACGGCGTTTTTGTTTCTTGCTCAGCAGGCAACTCAGGCCCTTTTGCATCGACAGTCGGAAACGGCGCACCGTGGATCATGACAGTTGCTGCTAGCTACATTGACAGAACTTTTCCAACACAAGTCAAACTTGGCAACTCAAAAACATTTGAAGGCACATCATTGTATCAAACAAAAAACCAAACCAACCAACAACTCCCACTTGTGCATGGAACAACAGCAGGTAAGAAGAGAGAAGCAATGTTTTGCACAAAAGGTTCACTAGATAAAAAACTTGTTTTCGGAAAAATCGTTGTTTGTGAAAGAGGTATCAATGGTAGAACCGAAAAAGGCGAGGTAGTGAAAAAATCAGGCGGATACGGAATCATACTACTCAACTCAGAGAATCAAGGCGAAGAGCTTCTCTCCGACGCTCACGTCTTACCAGGTACTTCATTAGGTGCATCAGCAGGTAAAGCCATAAGACTCTACCTCAACACTACTAAAAATCCAACAGCTTCAATTTCATTCCTAGGAACAAGATATGGTAACATTGCACCAATCATGGCAGCATTTTCTTCTCGAGGACCGAGTATCGTAGGACAAGACATCATCAAACCAGACATAACTGCACCAGGTGTTAACATCTTAGCAGCATGGCCATCAAAAACAAGTCCAAGCATGATCAAATCTGACAAGAGAAAAGTCCTATTCAACATAGTTTCAGGTACCTCAATGTCTTGTCCTCACGTAAGCGGCATCGCAGCGTTGATTAAATCAGTTCACAAAGACTGGTCACCTGCAATGATCAAGTCATCTCTTATGACAACAGCTTACACATCAAACAACAAAAATCTCCCGATTTCCGATCTCGCTTCAAATAACAACTCATCTTCTGCTAACCCTTTTGCATTTGGCTCAGGACATGTCAATCCCGAAAGCGCTTCTGATCCGGGATTAGTCTATGACATTACCACCAATGACTACTTAAACTACTTTTGCAGCCTTAACTTTACATCATCAGAGATTGCTATATTGACAAAAACTAACTTCACATGTTCTCAAAAACATGTTATTCAAGTTGGTGACTTGAACTATCCATCATTTTCTGTTTTGTTTAGCAGAACAGTGAAGAATGTGACATATAAAAGAGTTGTTACAAATGTTGGAAAATCAGAAAATGGTTACTATGAAGCTAAAGTTGAACAACCTAATGGAGTTGTTGTGAATGTTGAACCAAGGAGATTCAAGTTTGAGAAATTGGGTGAGAAATTAAGCTATAAAGTTACATTTTTAGCAATTGGAAAAACAAGAGTTGTTGGTAGTTCACTATGA 2265 0.4079 MSNIGFMMFRRVFLFMALMATNSIALAAQQTYIVHMDKTKIEGSIHSQDSTKTWSESVIDFITQASMEGEELEDILSPQLLYAYETNMFGFAATLSEKQLEHLRQIDGFLSVIPDELSTLDTTHTPSFLGLTNGKGLWSAPSLASDVIIGVLDSGIWPEHVSFKDSGFSPIPRKWKGVCQQGTKFTSLNCNKKLIGARYYYKGYEKFIGKINETTDYLSARDTQGHGTHTASTAAGNVVQNANIFGLAKGSATGMRRTSRIAAYKVCWLSGCANSDLLAAMDQAVSDGVDVLSLSLGSIPKPFYNDSIAIASFGATKNGVFVSCSAGNSGPFASTVGNGAPWIMTVAASYIDRTFPTQVKLGNSKTFEGTSLYQTKNQTNQQLPLVHGTTAGKKREAMFCTKGSLDKKLVFGKIVVCERGINGRTEKGEVVKKSGGYGIILLNSENQGEELLSDAHVLPGTSLGASAGKAIRLYLNTTKNPTASISFLGTRYGNIAPIMAAFSSRGPSIVGQDIIKPDITAPGVNILAAWPSKTSPSMIKSDKRKVLFNIVSGTSMSCPHVSGIAALIKSVHKDWSPAMIKSSLMTTAYTSNNKNLPISDLASNNNSSSANPFAFGSGHVNPESASDPGLVYDITTNDYLNYFCSLNFTSSEIAILTKTNFTCSQKHVIQVGDLNYPSFSVLFSRTVKNVTYKRVVTNVGKSENGYYEAKVEQPNGVVVNVEPRRFKFEKLGEKLSYKVTFLAIGKTRVVGSSL 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02575 754 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Vivi6g02575 754 Pfam Subtilase family 145 616 IPR000209 GO:0006508|GO:0008236
Vivi6g02575 754 Gene3D - 643 754 - -
Vivi6g02575 754 Pfam Peptidase inhibitor I9 31 117 IPR010259 -
Vivi6g02575 754 FunFam Subtilisin-like protease SBT1.5 146 371 - -
Vivi6g02575 754 Pfam PA domain 383 471 IPR003137 -
Vivi6g02575 754 FunFam subtilisin-like protease SBT1.5 352 492 - -
Vivi6g02575 754 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Vivi6g02575 754 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 121 IPR037045 -
Vivi6g02575 754 ProSiteProfiles Serine proteases, subtilase domain profile. 126 626 - -
Vivi6g02575 754 SUPERFAMILY Subtilisin-like 120 630 IPR036852 GO:0004252|GO:0006508
Vivi6g02575 754 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Vivi6g02575 754 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Vivi6g02575 754 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Vivi6g02575 754 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 744 IPR045051 -
Vivi6g02575 754 Pfam Fibronectin type-III domain 673 744 IPR041469 -
Vivi6g02575 754 Gene3D Peptidase S8/S53 domain 146 639 IPR036852 GO:0004252|GO:0006508
Vivi6g02575 754 Gene3D - 352 492 - -
Vivi6g02575 754 CDD Peptidases_S8_3 119 589 IPR034197 -
Vivi6g02575 754 CDD PA_subtilisin_like 359 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02575 Vivi-Chr6 109378547 109381433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02575 29 743 Subtilisin-like Serine Gene Family AT1G01900 56.389 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02575 - - gmx:100790006 1096.26