Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02574 ATGGATAATAATAACTATAGTTCATCTTCTCCATATGGATATCCAAACCCTTATATGTATCCCCCTAATCCCAACCCTAACCCTAACCCTAACCCTCATCAACCATATCCACCTCAAGGTTCAATTCCTGATCCATTTGCACATGCTCATCCACCATATCCACCTCAAGCTTCAGTTCCTGATCCATATGCTCATGCTCATGCTCATCCTTATCCATATCCTTATGGTTCTTCACATTCTTTGAACTATTCACATGCTAGATCGCCGTCTTTATCGTCATCACCATCGTTCAGTTCTAATGCCCCATACGAGTATCCATACCCTCCTCCTCCTCATCAGTTAGTACCACCACCCTCAGCTCCACCCTCTTATCCTTCTTATCCATACCATGTTCCTCCAGGGACTCATAACCCTCCTCAACCTGGCCTTTCGCACCATGCTAGCTTATTACAACATGGATCATCGTCGCATCATTATTATTATCCACACACTGCTCCTCATGAAGACCGTCCTGATGCCCATTCGCGTCATAATAGCTTCTCTGGTCATTACTGGCATGACACGTCTAGTTCAACAGCCGTTGGTGGTGTTGGTGTTGGTGGAGGATCGCAAAGTAGTGGTGGTGATAGTTCCAAACCTTCTGCTTATCCACGTTTGGATGAACTAATGAACAATGTTAAGTTGTCTGATGACCAATCAACTGCTCCTGCATCGCCTCCTGCTCCTGCTGCACAACCTTTTATGCATTCAATTTCGGTACCGAAGATTCAACAGAAGAAAGAGGATTTTTATGGACATTCTAATAATAACTCCTTCTCGGGTTGGGGATCCTCATACCCGAGCCGGGTGAACTCGGGTAGGCTTTCGGATTATTCTGGTTCATTTAATGACTCAATGCATAGTCAGAGCTTGCAGGTTGTTCCGGTGCAGAATAAAGGGTCCTTGAAAGTGTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTGGTAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACGATGAATAAGAAGATTACAAGTGATCCTTATGTTTCAATTTCAGTTTCAAATGCCGTAATTGGAAGGACTTTTGTCATTAGCAACAGTGAAAATCCTGTTTGGACTCAACATTTCTATGTTCCTGTCGCGCATAATGCCGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTTGTGGGTTCCCAGCTCATTGGTATTGTGGCGATTCCAGTGGAACAAATATACTCAGGGGAACAAGTTGAAGGAACTTACCCTATTCTGAATAGTAATGGGAAGCCTTGTAAGCAAGGTGCCGTATTGAGCCTATCCATTCAGTACATCCCAATGGAGCAACTGAGCTTTTATCATAAAGGAGTTGGAGCAGGGCCTGAATATATAGGTGTTCCTGCTACTTATTTTCCTTTGAGGAAAGGTGGAAATGTTACTCTATATCAAGATGCTCATGTTCCAGATGGTAGTCTCCCGAATGTGTTGCTTGATAGTGGGATGTTTTATGTGCATGGAAAGTGTTGGCATGACATATTTGATGCCATAAGTCAAGCTCGCCGCTTGATTTATATTACAGGATGGTCAGTGTGGCACAAAGTTAGGTTGGTAAGAGATGCCGGTCATGCATCAGATTATACGTTGGGTGATCTTCTGAGGACAAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCAAGAAGTATTTTGGGTTATAAAACAGATGGTGTTATGGCAACTCATGATGAGGAAACTAGACGATTTTTCAAGCACTCGTCAGTGAATGTGCTGCTTTGTCCTCGCAGTGCTGGAAAACGCCATAGCTGGGTCAAGCAAAAGGAAGTTGGAACTATATATACTCATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTATGTGATGGCCGATATGATACTCCTCAACATCCTCTCTTTAAGACACTACAAACAATACATAAGGATGACTATCACAACCCAACTTACACGGGTAACACTGGTGGTTGTCCAAGGGAGCCATGGCATGATTTGCATACTAAAATTGATGGTCCGGCAGCTTATGATGTCTTAACTAACTTTGAGGAACGCTGGTTAAAAGCTTCAAAACCACAAGGGATAAAGAAGTTGAAAATTTCATATGATGATGCTTTACTTAGACTGGAAAGAATTCCAGACGTTATTGGCATTAACGACACTCCTAGTGGTGACGATGATCCTGAATCATGGCATGTTCAGATATTTCGTTCTATTGATTCAAATTCAGTTAAGGGATTTCCAAAAGACCCAAGAGAGGCAACTGGCAAGAACCTTGTATGTGGGAAGAATGCGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATCCGTGCTGCACAGCATTACATTTATATCGAGAATCAATATTTCATAGGGTCTTCTTACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATTCCGATGGAAATTGCTCTAAAGATTGCTGAAAAGATTAGAGCAAATGAGAGGTTTGCAGTTTATATAGTTATTCCAATGTGGCCCGAAGGTGTTCCAACAGGTGCTGCCACACAAAGGATTCTATTCTGGCAGAATAAAACAATGCAAATGATGTATGAAACAATTTCTAAGGCTTTAGTTGAGGCCGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAATTTTTTCTGTCTTGGTAATCGAGAGGCCATAAATATGTACGAAAATGTCAATGTATCAGGAAATCCTCCGCCGGCAAATAGTCCACAAGCAAATTGTCGAAATAGCCGACGATTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATTGTGGGATCTGCGAACATTAACCAACGCTCTATGGAAGGAACGAGGGACAGCGAGATTGCAATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAATATTCCTATCCACTTGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACCGGAACACTTGATGACTGCTTCTTGCAACCTGAGAGCCTTGAATGCGTACGAAGAGTTAGAGCAATTGGTGAAATGAACTGGAAACAATTTGCAGCAAGTGAAGTATCAGAGATGAGAGGGCATCTTCTAAAATACCCTGTAGATGCTGATCGAAAGGGGAAAGTCAGATCACTTCCCGGTCATGAAGAGTTTCCTGATGTAGGAGGGAAAATTGTTGGATCTTTTCTTGCCATGAAGGAGAATCTTACCATTTGA 3408 0.4178 MDNNNYSSSSPYGYPNPYMYPPNPNPNPNPNPHQPYPPQGSIPDPFAHAHPPYPPQASVPDPYAHAHAHPYPYPYGSSHSLNYSHARSPSLSSSPSFSSNAPYEYPYPPPPHQLVPPPSAPPSYPSYPYHVPPGTHNPPQPGLSHHASLLQHGSSSHHYYYPHTAPHEDRPDAHSRHNSFSGHYWHDTSSSTAVGGVGVGGGSQSSGGDSSKPSAYPRLDELMNNVKLSDDQSTAPASPPAPAAQPFMHSISVPKIQQKKEDFYGHSNNNSFSGWGSSYPSRVNSGRLSDYSGSFNDSMHSQSLQVVPVQNKGSLKVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNKKITSDPYVSISVSNAVIGRTFVISNSENPVWTQHFYVPVAHNAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGEQVEGTYPILNSNGKPCKQGAVLSLSIQYIPMEQLSFYHKGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGSLPNVLLDSGMFYVHGKCWHDIFDAISQARRLIYITGWSVWHKVRLVRDAGHASDYTLGDLLRTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVNVLLCPRSAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPQHPLFKTLQTIHKDDYHNPTYTGNTGGCPREPWHDLHTKIDGPAAYDVLTNFEERWLKASKPQGIKKLKISYDDALLRLERIPDVIGINDTPSGDDDPESWHVQIFRSIDSNSVKGFPKDPREATGKNLVCGKNALIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETISKALVEAGLEAAFSPQDYLNFFCLGNREAINMYENVNVSGNPPPANSPQANCRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKYSYPLGQIHGYRMSLWAEHTGTLDDCFLQPESLECVRRVRAIGEMNWKQFAASEVSEMRGHLLKYPVDADRKGKVRSLPGHEEFPDVGGKIVGSFLAMKENLTI 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02574 1135 Gene3D C2 domain 317 462 IPR035892 -
Vivi6g02574 1135 Pfam Phospholipase D C terminal 1055 1125 IPR024632 -
Vivi6g02574 1135 FunFam Phospholipase D 794 1027 - -
Vivi6g02574 1135 SUPERFAMILY Phospholipase D/nuclease 827 1067 - -
Vivi6g02574 1135 FunFam Phospholipase D delta 317 464 - -
Vivi6g02574 1135 SUPERFAMILY Phospholipase D/nuclease 525 746 - -
Vivi6g02574 1135 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 647 682 IPR001736 GO:0003824
Vivi6g02574 1135 SMART C2_3c 323 445 IPR000008 -
Vivi6g02574 1135 MobiDBLite consensus disorder prediction 102 139 - -
Vivi6g02574 1135 MobiDBLite consensus disorder prediction 77 101 - -
Vivi6g02574 1135 SMART pld_4 981 1008 IPR001736 GO:0003824
Vivi6g02574 1135 SMART pld_4 647 682 IPR001736 GO:0003824
Vivi6g02574 1135 Gene3D Endonuclease Chain A 527 761 - -
Vivi6g02574 1135 Pfam C2 domain 322 448 IPR000008 -
Vivi6g02574 1135 MobiDBLite consensus disorder prediction 162 181 - -
Vivi6g02574 1135 Pfam Phospholipase D Active site motif 982 1008 IPR001736 GO:0003824
Vivi6g02574 1135 Pfam Phospholipase D Active site motif 648 682 IPR001736 GO:0003824
Vivi6g02574 1135 ProSiteProfiles C2 domain profile. 300 446 IPR000008 -
Vivi6g02574 1135 MobiDBLite consensus disorder prediction 15 59 - -
Vivi6g02574 1135 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 320 470 IPR035892 -
Vivi6g02574 1135 Gene3D Endonuclease Chain A 796 1035 - -
Vivi6g02574 1135 PANTHER PHOSPHOLIPASE D 312 1126 IPR015679 -
Vivi6g02574 1135 MobiDBLite consensus disorder prediction 182 212 - -
Vivi6g02574 1135 MobiDBLite consensus disorder prediction 141 158 - -
Vivi6g02574 1135 FunFam Phospholipase D delta 523 761 - -
Vivi6g02574 1135 CDD C2_plant_PLD 316 469 - -
Vivi6g02574 1135 MobiDBLite consensus disorder prediction 1 217 - -
Vivi6g02574 1135 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 981 1008 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02574 Vivi-Chr6 109375830 109384823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02574 96 1135 Phospholipase D Gene Family (Wang group) AT2G42010 68.587 0.0 1459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02574 K01115 - gmx:100801286 1767.28