Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02573 ATGTCCAACATAGGCATCATGATGTTTAGGAGAGTCTTTTTATTCGTGGCTCTTATGGCGACGAATTCAATCGCGCTCGCGGCGCAACAAACATATATAGTCCACATGGACAAGACCAAAATTGAAGGCTCAATTCATTCTCAAGACAGCACAAAAGCATGGTCTGAGTCAATCATTGATTTCATTACTCAAGCTTCAATGGAGCGAGAAGAGATAGAAGATATTCTATCACCTCAGCTTCTATATGCCTATGAAACCAACATGTTTGGTTTTGCAGCCACACTTTCTGAGAAACAGCTTAAACAGTTAAACCAAATTGATGGTTTTCTTTCAGCCATACCTGATGAACTATCAACCCTCGATACGACACATACACCAAGTTTTCTTGGCCTAGCAAATGGAAAAGGACTTTGGAGTACTCCGAGTTTGGCCTCCGATGTGATCATCGGTGTCCTTGATTCGGGAATATGGCCCGAGCATGTCAGTTTCAAAGACTCGGGCTTTTCCCCGATCCCTCGTAAATGGAAAGGTGTTTGTCAACAAGGCACAAAATTCACATCCTCAAATTGTAACAAGAAGCTTATTGGCGCAAGATACTATTACAAAGGGTACGAAAAATTCATCGGGAAAATCAACGAAACAACTGATTATCTTTCTGCTAGAGACACTCAAGGGCATGGAACTCACACTGCCTCGACCGCAGCAGGTAATGTGGTTCAAAATGCAAACATTTTTGGACTTGCTAAAGGCTCAGCCACTGGAATGAGGCGTACATCAAGAATCGCGGCTTATAAAGTTTGCTGGCTTTCTGGCTGCGCGAATTCCGACCTATTAGCAGCCATGGACCAAGCAGTTTCCGACGGTGTTGATGTACTTTCACTATCTTTAGGAAGTATTCCAAAACCATTTTATAATGATAGCATTGCTATAGCTTCATTCGGAGCAACAAAAAACGGCGTTTTTGTTTCTTGCTCAGCAGGCAACTCAGGCCCTTTTGCATCAACAGTCGGAAACGGCGCACCGTGGATCATGACAGTTGCTGCTAGCTACATTGACAGAACTTTTCCAACAGAAGTCAAACTTGGAAACTCAAAAACATTTGAAGGCACATCATTGTATCAAACAAAAAACCAAACCAACCAACAACTCCCACTTGTGCATGGAACAACAGCAGGTAAAAAGAGAGAAGCAATGTTTTGCACAAAAGGTTCACTAGATAAAAAACTTGTTTTCGGAAAAATAGTCGTTTGCGAAAGAGGAATCAATGGTAGAACCGAAAAAGGCGAGGTAGTGAAAAAATCAGGCGGATACGGAATTATACTACTCAACTCAGAGAATCAAGGCGAAGAGCTTCTCTCCGACGCTCACGTCTTACCTGGTACTTCATTAGGCGCTTCAGCAGGTAAAGCCATAAGAATCTACCTCAACACTACTAAAAACCCAACAGCTTCAATTTCATTCCTAGGAACAAGATATGGTAACATTGCACCAATCATGGCAGCATTTTCTTCTCGAGGACCGAGTATCGTAGGACAAGATATCATCAAACCAGACATAACTGCACCAGGTGTTAACATCTTAGCAGCATGGCCATCAAAAACAAGTCCAAGCATGATCAAATCTGACAAGAGAAAAGTCCTATTCAACATAGTTTCAGGTACCTCAATGTCTTGTCCTCACGTAAGCGGCATCGCAGCGTTGATTAAATCAGTTCACAAAGACTGGTCACCTGCAATGATCAAGTCATCTCTTATGACAACAGCTTACACATTAAACAACAAAAACCTCCCGATTTCCGATCTCGCTTCAAATAACAACTCATCTTCTGCTAACCCTTTTGCATTTGGCTCAGGACATGTTAATCCCGAAAGCGCTTCTGATCCTGGATTAGTCTATGACATTACCACCAATGACTACTTGAACTACTTTTGCAGCCTTAACTTCACATCATCAGAGATTGCTATATTAACAAAAACTAACTTCACATGTTCTCAAAAACATGTTGTACAAGTTGGTGACTTGAACTATCCTTCATTTTCTGTTTTGTTTAGCAGAACAGTGAAGAATGTGACATATAAAAGAGTTGTTACAAATGTTGGAAAATCAGAAAGTGGTTACTATGAAGCTAAAGTTGAACAACCTAATGGAGTTGTTGTGAATGTTGAACCAAGGAGATTGAAGTTTGAGAAATTGGGTCAGAAATTAAGCTATACAGTTACATTTTTAGCAATTGGAAAAACAAGAGTTGTTGGTAGTTCATCATTTGGATCACTCATTTGGGTTTCTGGCAAATATAGAGTTAGAAGTCCTATTGCAGTAACATGGCAATAG 2331 0.4071 MSNIGIMMFRRVFLFVALMATNSIALAAQQTYIVHMDKTKIEGSIHSQDSTKAWSESIIDFITQASMEREEIEDILSPQLLYAYETNMFGFAATLSEKQLKQLNQIDGFLSAIPDELSTLDTTHTPSFLGLANGKGLWSTPSLASDVIIGVLDSGIWPEHVSFKDSGFSPIPRKWKGVCQQGTKFTSSNCNKKLIGARYYYKGYEKFIGKINETTDYLSARDTQGHGTHTASTAAGNVVQNANIFGLAKGSATGMRRTSRIAAYKVCWLSGCANSDLLAAMDQAVSDGVDVLSLSLGSIPKPFYNDSIAIASFGATKNGVFVSCSAGNSGPFASTVGNGAPWIMTVAASYIDRTFPTEVKLGNSKTFEGTSLYQTKNQTNQQLPLVHGTTAGKKREAMFCTKGSLDKKLVFGKIVVCERGINGRTEKGEVVKKSGGYGIILLNSENQGEELLSDAHVLPGTSLGASAGKAIRIYLNTTKNPTASISFLGTRYGNIAPIMAAFSSRGPSIVGQDIIKPDITAPGVNILAAWPSKTSPSMIKSDKRKVLFNIVSGTSMSCPHVSGIAALIKSVHKDWSPAMIKSSLMTTAYTLNNKNLPISDLASNNNSSSANPFAFGSGHVNPESASDPGLVYDITTNDYLNYFCSLNFTSSEIAILTKTNFTCSQKHVVQVGDLNYPSFSVLFSRTVKNVTYKRVVTNVGKSESGYYEAKVEQPNGVVVNVEPRRLKFEKLGQKLSYTVTFLAIGKTRVVGSSSFGSLIWVSGKYRVRSPIAVTWQ 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02573 776 Gene3D - 643 775 - -
Vivi6g02573 776 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Vivi6g02573 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 121 IPR037045 -
Vivi6g02573 776 SUPERFAMILY Subtilisin-like 120 630 IPR036852 GO:0004252|GO:0006508
Vivi6g02573 776 FunFam Subtilisin-like protease SBT1.5 643 776 - -
Vivi6g02573 776 Pfam Peptidase inhibitor I9 31 116 IPR010259 -
Vivi6g02573 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Vivi6g02573 776 Gene3D - 352 492 - -
Vivi6g02573 776 Pfam PA domain 383 471 IPR003137 -
Vivi6g02573 776 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Vivi6g02573 776 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Vivi6g02573 776 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Vivi6g02573 776 Pfam Subtilase family 145 616 IPR000209 GO:0006508|GO:0008236
Vivi6g02573 776 Pfam Fibronectin type-III domain 673 773 IPR041469 -
Vivi6g02573 776 FunFam subtilisin-like protease SBT1.5 352 492 - -
Vivi6g02573 776 FunFam Subtilisin-like protease SBT1.5 146 371 - -
Vivi6g02573 776 Gene3D Peptidase S8/S53 domain 146 639 IPR036852 GO:0004252|GO:0006508
Vivi6g02573 776 ProSiteProfiles Serine proteases, subtilase domain profile. 126 626 - -
Vivi6g02573 776 CDD PA_subtilisin_like 359 485 - -
Vivi6g02573 776 CDD Peptidases_S8_3 119 589 IPR034197 -
Vivi6g02573 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 773 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02573 Vivi-Chr6 109368053 109371070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02573 29 776 Subtilisin-like Serine Gene Family AT1G01900 56.972 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02573 - - gmx:100790006 1150.19