Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02572 ATGATGTTTAGGAGAGTCTTTTTATTCGTGGCTCTTATGGCGACGAATTCAATCGCGCTCGCGGCGCAACAAACATATATAGTCCACATGGACAAGACCAAAATTGAAGGCTCAATTCATTCTCAAGACAGCACAAAAGCATGGTCTGAGTCAATCATTGATTTCATTACTCAAGCTTCAATGGAGCGAGAAGAGATAGAAGATATTCTATCACCTCAGCTTCTATATGCCTATGAAACCAACATGTTTGGTTTTGCAGCCACACTTTCTGAGAAACAGCTTAAACAGTTAAACCAAATTGATGGTTTTCTTTCAGCCATACCTGATGAACTATCAACCCTCGATACGACACATACACCAAGTTTTCTTGGCCTAGCAAATGGAAAAGGACTTTGGAGTACTCCGAGTTTGGCCTCCGATGTGATCATCGGTGTCCTTGATTCGGGAATATGGCCCGAGCATGTCAGTTTCAAAGACTCGGGCTTTTCCCCGATCCCTCGTAAATGGAAAGGTGTTTGTCAACAAGGCACAAAATTCACATCCTCAAATTGTAACAAGAAGCTTATTGGCGCAAGATACTATTACAAAGGGTACGAAAAATTCATCGGGAAAATCAACGAAACAACTGATTATCTTTCTGCTAGAGACACTCAAGGGCATGGAACTCACACTGCCTCGACCGCAGCAGGTAATGTGGTTCAAAATGCAAACATTTTTGGACTTGCTAAAGGCTCAGCCACTGGAATGAGGCGTACATCAAGAATCGCGGCTTATAAAGTTTGCTGGCTTTCTGGCTGCGCGAATTCCGACCTATTAGCAGCCATGGACCAAGCAGTTTCCGACGGTGTTGATGTACTTTCACTATCTTTAGGAAGTATTCCAAAACCATTTTATAATGATAGCATTGCTATAGCTTCATTCGGAGCAACAAAAAACGGCGTTTTTGTTTCTTGCTCAGCAGGCAACTCAGGCCCTTTTGCATCAACAGTCGGAAACGGCGCACCGTGGATCATGACAGTTGCTGCTAGCTACATTGACAGAACTTTTCCAACAGAAGTCAAACTTGGAAACTCAAAAACATTTGAAGGCACATCATTGTATCAAACAAAAAACCAAACCAACCAACAACTCCCACTTGTGCATGGAACAACAGCAGGTAAAAAGAGAGAAGCAATGTTTTGCACAAAAGGTTCACTAGATAAAAAACTTGTTTTCGGAAAAATAGTCGTTTGCGAAAGAGGAATCAATGGTAGAACCGAAAAAGGCGAGGTAGTGAAAAAATCAGGCGGATACGGAATTATACTACTCAACTCAGAGAATCAAGGCGAAGAGCTTCTCTCCGACGCTCACGTCTTACCTGGTACTTCATTAGGCGCTTCAGCAGGTAAAGCCATAAGAATCTACCTCAACACTACTAAAAACCCAACAGCTTCAATTTCATTCCTAGGAACAAGATATGGTAACATTGCACCAATCATGGCAGCATTTTCTTCTCGAGGACCGAGTATCGTAGGACAAGATATCATCAAACCAGACATAACTGCACCAGGTGTTAACATCTTAGCAGCATGGCCATCAAAAACAAGTCCAAGCATGATCAAATCTGACAAGAGAAAAGTCCTATTCAACATAGTTTCAGGTACCTCAATGTCTTGTCCTCACGTAAGCGGCATCGCAGCGTTGATTAAATCAGTTCACAAAGACTGGTCACCTGCAATGATCAAGTCATCTCTTATGACAACAGCTTACACATTAAACAACAAAAACCTCCCGATTTCCGATCTCGCTTCAAATAACAACTCATCTTCTGCTAACCCTTTTGCATTTGGCTCAGGACATGTTAATCCCGAAAGCGCTTCTGATCCTGGATTAGTCTATGACATTACCACCAATGACTACTTGAACTACTTTTGCAGCCTTAACTTCACATCATCAGAGATTGCTATATTAACAAAAACTAACTTCACATGTTCTCAAAAACATGTTGTACAAGTTGGTGACTTGAACTATCCTTCATTTTCTGTTTTGTTTAGCAGAACAGTGAAGAATGTGACATATAAAAGAGTTGTTACAAATGTTGGAAAATCAGAAAGTGGTTACTATGAAGCTAAAGTTGAACAACCTAATGGAGTTGTTGTGAATGTTGAACCAAGGAGATTGAAGTTTGAGAAATTGGGTCAGAAATTAAGCTATACAGTTACATTTTTAGCAATTGGAAAAACAAGAGTTGTTGGTAGTTCATCATTTGGATCACTCATTTGGGTTTCTGGCAAATATAGAGTTAGAAGTCCTATTGCAGTAACATGGCAATAG 2313 0.4068 MMFRRVFLFVALMATNSIALAAQQTYIVHMDKTKIEGSIHSQDSTKAWSESIIDFITQASMEREEIEDILSPQLLYAYETNMFGFAATLSEKQLKQLNQIDGFLSAIPDELSTLDTTHTPSFLGLANGKGLWSTPSLASDVIIGVLDSGIWPEHVSFKDSGFSPIPRKWKGVCQQGTKFTSSNCNKKLIGARYYYKGYEKFIGKINETTDYLSARDTQGHGTHTASTAAGNVVQNANIFGLAKGSATGMRRTSRIAAYKVCWLSGCANSDLLAAMDQAVSDGVDVLSLSLGSIPKPFYNDSIAIASFGATKNGVFVSCSAGNSGPFASTVGNGAPWIMTVAASYIDRTFPTEVKLGNSKTFEGTSLYQTKNQTNQQLPLVHGTTAGKKREAMFCTKGSLDKKLVFGKIVVCERGINGRTEKGEVVKKSGGYGIILLNSENQGEELLSDAHVLPGTSLGASAGKAIRIYLNTTKNPTASISFLGTRYGNIAPIMAAFSSRGPSIVGQDIIKPDITAPGVNILAAWPSKTSPSMIKSDKRKVLFNIVSGTSMSCPHVSGIAALIKSVHKDWSPAMIKSSLMTTAYTLNNKNLPISDLASNNNSSSANPFAFGSGHVNPESASDPGLVYDITTNDYLNYFCSLNFTSSEIAILTKTNFTCSQKHVVQVGDLNYPSFSVLFSRTVKNVTYKRVVTNVGKSESGYYEAKVEQPNGVVVNVEPRRLKFEKLGQKLSYTVTFLAIGKTRVVGSSSFGSLIWVSGKYRVRSPIAVTWQ 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02572 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 767 IPR045051 -
Vivi6g02572 770 FunFam Subtilisin-like protease SBT1.5 140 365 - -
Vivi6g02572 770 Pfam Subtilase family 139 610 IPR000209 GO:0006508|GO:0008236
Vivi6g02572 770 Pfam PA domain 377 465 IPR003137 -
Vivi6g02572 770 Gene3D Peptidase S8/S53 domain 140 633 IPR036852 GO:0004252|GO:0006508
Vivi6g02572 770 SUPERFAMILY Subtilisin-like 114 624 IPR036852 GO:0004252|GO:0006508
Vivi6g02572 770 FunFam Subtilisin-like protease SBT1.5 637 770 - -
Vivi6g02572 770 Gene3D - 637 769 - -
Vivi6g02572 770 Pfam Peptidase inhibitor I9 25 110 IPR010259 -
Vivi6g02572 770 CDD Peptidases_S8_3 113 583 IPR034197 -
Vivi6g02572 770 CDD PA_subtilisin_like 353 479 - -
Vivi6g02572 770 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 143 154 IPR023827 -
Vivi6g02572 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 115 IPR037045 -
Vivi6g02572 770 Pfam Fibronectin type-III domain 667 767 IPR041469 -
Vivi6g02572 770 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Vivi6g02572 770 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Vivi6g02572 770 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Vivi6g02572 770 ProSiteProfiles Serine proteases, subtilase domain profile. 120 620 - -
Vivi6g02572 770 FunFam subtilisin-like protease SBT1.5 346 486 - -
Vivi6g02572 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Vivi6g02572 770 Gene3D - 346 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02572 Vivi-Chr6 109367938 109371070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02572 23 770 Subtilisin-like Serine Gene Family AT1G01900 56.972 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02572 - - gmx:100790006 1149.04