Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02571 ATGGTTTTGCAGAAACAGACCAAATTCTTTCCTTTTCTTTGTGTTCAATTGTTTCTACTCGTCTTGTTAAGCATTGGTTCTTCGGTACATGGAGTCGATCAAAAGAACTTTTACATTATTTTCTTGGGAGGGAAACCTGAAAGCAGAGACATTGCGCATCAGACTCATTTAAATGTTCTATCTTCTGTCAAGGGAAGCTATCATGAAGCGGAAGAGTCGATTGTATATAGCTACACGGAGAGCTTCAATGCATTTGCTGCAAAACTATCTGAACATGAAGCAGATAAGTTATCTGACATGAATGAAGTTGTTTTGGTGTTTAAAAACCGGTATCGTAAGCTACACACAACAAGATCATGGAACTTCATTGGTTTGCCTCTCACTGCTAAAAGAAGATTGAAATTAGAACGCGACATAGTTGTTGCTCTTTTGGACACAGGGATCACACCGGAGTCGAAAAGCTTCAAAGATGATGGATTAGGTCCGCCACCAGCAAGATGGAAAGGAACTTGTGGCCACTATGCTAATTTCTCAGGCTGTAACAACAAGATCATAGGAGCCAAATACTTCAAGGCTGATAAAAACCCTGATCCATCCGACATACTATCCCCGATAGACATTGATGGTCATGGAACTCACACCGCATCAACAGCAGCAGGTGATTTAATACCAAATGCAAGTCTCTTTGGATTGGCCAACGGAACTTCACGCGGCGCCGTGCCATCAGCTAGGTTGGCAATTTACAAAGTCTGTTGGTCATCAACTGGATGCGCAGACATGGACATACTTGCTGCATTTGATGCTGCTATTCATGATGGTGTGGATGTCATATCGATTTCCATAGGCGGAGGAAGTTCTGATTATGTTCATGACCCGATATCAATCGGCGCGTTTCATGCCATGAGGAAAGGTATAATCACTGTTGCATCAGCTGGAAATGATGGTCCAAGTATGGCAACTGTAACAAATAATGCACCATGGATTGTCACGGTAGCCGCTAGCGGCATTGATCGAGCTTTCAAGAGCACTGTACAATTAGGGAGTGGAAAAAATGTTTCTGGTATTGGAATTAATTGTTTCAATCCAAAACAAAACCAGTACCCTATTATTAACGGGATTGATGCTGCGAAAGACTCGAAAAGCAAGGAAGATGCCAAATCATGCTTCTCAGGCTCCTTACAGGAAAATAAGGTGAAGGGAAAGCTTGTTTACTGCTTAGCATCATGGGGGACTGAAGCTAATGTAAGAGAAATCGGAGGCATTGGTGCTGTCTTAGGATACGATAGTTATCCCGATGTTGCACAAATTTTCATGGCTCCTGCTACTGTTGTCAATCATAGCATAGGTGACACTGTTACTAATTATATCAAATCTACAAGATCACCATCCGCGGTAATATACAAGAGTCATGAAGAAAAAGTGCAAGCACCATTTACTGCTACATTCTCATCTAGAGGACCGAATCCGGGATCTAAGCATATCCTCAAGCCTGACATAGCAGCTCCTGGTATCGACATCTTAGCATCATATACGCTTAGAAAATCACTTACTGGTTTGACAGGAGATAAACAATTTTCAGAATTTTCTATAATATCCGGAACATCCATGGCATGTCCTCATGTTGCTGGAGTAGCAGCATATGTGAAATCCTTTCACCCCAATTGGACTCCTGCTGCAATCAGATCTGCTATTATCACTACCGCGAAACCTATGAGTAAAAGAATTAACAACGAAGCGGAATTCGCCTTTGGTTCTGGTCAACTAAACCCGACAAGAGCTGTTTCTCCTGGTTTAATCTACGATATGGATGACTTTGGTTATATCCAATTTCTATGCCATGAAGGTTACAAAGATTCAAGTTTATCAGCACTAGTTGGTTCTCGTATAAATTGTTCCTCAATACTTCCTGGACTTGGCCATGATGCTATCAACTATCCAACGATGCAACTTAGCTTGGAAAGCAAGAAAAGCGCAGCGGTTTTTAGAAGAACAGTTACCAATGTAGGTCCTGTTCCAGTTATCTACAATGCTACTATTAGATCGCCAAAAGGAGTTGAAATCACGGTGAAGCCTAGTTTTCTTAGTTTTGATAGAAAAATGCAGAAGAGGAGCTTTGAAGTGGTTGTGAAAGTAAAATCTATTGCAAGTATGGAGATTCTATCAGGTTCACTTATATGGAGAAGTCCACGTTACATTGTTAGAAGTCCTATAGTTGTTTACAAGCCATAA 2229 0.4114 MVLQKQTKFFPFLCVQLFLLVLLSIGSSVHGVDQKNFYIIFLGGKPESRDIAHQTHLNVLSSVKGSYHEAEESIVYSYTESFNAFAAKLSEHEADKLSDMNEVVLVFKNRYRKLHTTRSWNFIGLPLTAKRRLKLERDIVVALLDTGITPESKSFKDDGLGPPPARWKGTCGHYANFSGCNNKIIGAKYFKADKNPDPSDILSPIDIDGHGTHTASTAAGDLIPNASLFGLANGTSRGAVPSARLAIYKVCWSSTGCADMDILAAFDAAIHDGVDVISISIGGGSSDYVHDPISIGAFHAMRKGIITVASAGNDGPSMATVTNNAPWIVTVAASGIDRAFKSTVQLGSGKNVSGIGINCFNPKQNQYPIINGIDAAKDSKSKEDAKSCFSGSLQENKVKGKLVYCLASWGTEANVREIGGIGAVLGYDSYPDVAQIFMAPATVVNHSIGDTVTNYIKSTRSPSAVIYKSHEEKVQAPFTATFSSRGPNPGSKHILKPDIAAPGIDILASYTLRKSLTGLTGDKQFSEFSIISGTSMACPHVAGVAAYVKSFHPNWTPAAIRSAIITTAKPMSKRINNEAEFAFGSGQLNPTRAVSPGLIYDMDDFGYIQFLCHEGYKDSSLSALVGSRINCSSILPGLGHDAINYPTMQLSLESKKSAAVFRRTVTNVGPVPVIYNATIRSPKGVEITVKPSFLSFDRKMQKRSFEVVVKVKSIASMEILSGSLIWRSPRYIVRSPIVVYKP 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02571 742 Gene3D - 337 472 - -
Vivi6g02571 742 Pfam Peptidase inhibitor I9 38 115 IPR010259 -
Vivi6g02571 742 SUPERFAMILY Subtilisin-like 119 594 IPR036852 GO:0004252|GO:0006508
Vivi6g02571 742 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Vivi6g02571 742 ProSiteProfiles Serine proteases, subtilase domain profile. 119 594 - -
Vivi6g02571 742 CDD Peptidases_S8_3 113 568 IPR034197 -
Vivi6g02571 742 Pfam Subtilase family 137 585 IPR000209 GO:0006508|GO:0008236
Vivi6g02571 742 Gene3D - 611 741 - -
Vivi6g02571 742 Gene3D Peptidase S8/S53 domain 138 604 IPR036852 GO:0004252|GO:0006508
Vivi6g02571 742 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Vivi6g02571 742 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Vivi6g02571 742 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Vivi6g02571 742 CDD PA_subtilisin_like 343 466 - -
Vivi6g02571 742 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 115 IPR037045 -
Vivi6g02571 742 FunFam Subtilisin-like protease SBT5.3 27 115 - -
Vivi6g02571 742 FunFam Subtilisin-like protease SBT1.5 138 387 - -
Vivi6g02571 742 Pfam Fibronectin type-III domain 643 739 IPR041469 -
Vivi6g02571 742 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 68 739 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02571 Vivi-Chr6 109347221 109350826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02571 35 582 Subtilisin-like Serine Gene Family AT4G00230 65.209 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02571 - - gmx:100795950 1136.32