Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02564 ATGCCCAAAAGATCACCACCACCAATGACACCATATCTCACGGCACTCCTCCTACTCACCACCATCTCCGCCGCATCCGCCGCAACCGAATATAAAAACCACACCGTAGGCGGCACCTCCGGCTGGTTCTTCAACTCAACCACCAACACTTCCGCCACAAACTACTCCTCTTGGGCTTCCACTCAAACCTTCAACCTCGGCGATTATCTCATTTTCAACACGAACTCAAATCAGAGTGTGGTTCTCACCTACAACAACACCGTTTACTTGAACTGCACCGCCGATGATTCCGATAACGGAACATTCATATACAACAGCGGAACTTTCAACCAGACGTTGACTATTCCCGTTCCGTTGACTATTGTGGGACCCAACTACTTCTTCTCCGACACTAGCGACGGTGTTCAGTGTCAGCACGGATTGGCGTTTGAGATCCAGGTTCAGCGTGGTTTGGGCTTACCGCCGAGTCTAAATCAGCCTCCTCCGCCGCCGTATAAGGAGCCGCCTGGTCCTGATAGTGCTGAATCTCCGACAGTTGCGGTGGCGGATGTGCCAAAAAATGGCGCGTTTGTGAAACGTGTTGACGTGCGCGTGGTGGTTTATGGGTTGGGTGTAGTGATGGTGTTGCTGCAATTTTGGTGA 642 0.5171 MPKRSPPPMTPYLTALLLLTTISAASAATEYKNHTVGGTSGWFFNSTTNTSATNYSSWASTQTFNLGDYLIFNTNSNQSVVLTYNNTVYLNCTADDSDNGTFIYNSGTFNQTLTIPVPLTIVGPNYFFSDTSDGVQCQHGLAFEIQVQRGLGLPPSLNQPPPPPYKEPPGPDSAESPTVAVADVPKNGAFVKRVDVRVVVYGLGVVMVLLQFW 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02564 213 SUPERFAMILY Cupredoxins 32 148 IPR008972 -
Vivi6g02564 213 Pfam Plastocyanin-like domain 50 140 IPR003245 GO:0009055
Vivi6g02564 213 PANTHER BLUE COPPER PROTEIN 33 159 IPR039391 GO:0009055
Vivi6g02564 213 ProSiteProfiles Phytocyanin domain profile. 32 149 IPR003245 GO:0009055
Vivi6g02564 213 Gene3D - 31 151 IPR008972 -
Vivi6g02564 213 MobiDBLite consensus disorder prediction 153 178 - -
Vivi6g02564 213 MobiDBLite consensus disorder prediction 155 171 - -
Vivi6g02564 213 FunFam Early nodulin-like protein 18 31 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02564 Vivi-Chr6 109118324 109119300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02564 7 187 Phytocyanin Superfamily AT1G08500 37.306 1.19e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02564 - - psat:127127184 302.367