Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02559 ATGGAGAACCAAACGCTTCTCCTACTTATTACTTTTATGAGTGCAACTATTCTTATCTTCATTCTTAGAAATAAAAAATCTACAAAACTTCCACCAGGGCCATACCCACTTCCCATCATAGGTAACATCTTAGAACTTGGCAAAAACCCACACAAATCTCTCACAAAACTCTCTAAAACCTATGGACCAATCATGACACTAAAATTAGGAACAAGAATAACCATAGTAATCTCATCCCCTCAAGTAGCCAAACAAGTCTTACATGAAAATAGCCATATCTTCTCCAACAGAACTGTCCCTCATGCACTTTTTGCAGTTGACCATCACAAATTCTCAGTTGGGTGGCTTCCAACATTAGCTTTGTGGAAGAAACTAAGAAAAGTTTGTGCCACAAAAGTATTTTCCACACAAATGCTTGACTCAACAAAAATCCTTCGCCAACAGAAACTGCAAGAATTATTGGATTATGTGAAAGAAAAAAGCAAGAAAGGTGAGGCTTTTGATATTGGTGAGGCTGTTTTTACAACTGTGCTTAATTCAATTTCAAACACTTTGTTCTCTATGGATTTGGCTCATTCCACACATGATGAAAAGTCTCAAGAGTTTAAGAATATTATTTGGGGTATCATGGAAGAAGCTGGTAACCCTAATGTTTCAGATTTCTTTCCTATCCTTGGTCCTTTAGATCCACAAGGTTTTTATTCAAGGATGACAAATCACATGAAGAAGTTGTGTGAGATTTTTGATAAAATTATTGAAGAAAGAGTTTCCTCAAGATCTTCCAGAGTTGATGATTCTGAAGATGTTTGCAATGATGTGTTGGATTCACTTCTCAAAAACAATATTGAAGAAACCTCTTCAGAATTGAGCCGCAAAGAGATGGTGCATCTATTTCTGGATTTATTTGTTGCTGGGATTGATACAACATCAAGCATAATTGAATGGATAATGGCAGAGTTATTACGAAATCCTGAAAAATTAATAAAAGCAAAGAAAGAGTTAAGTCAAACAATTGATAAAGATGAAATAATTGAAGAGTCACATATTTCAAAGCTAATCTTCTTACAAGCAATAGTGAAGGAAACATTTCGTTTGCACCCACCAATTCCATTATTGCTACCCCACAAATGTGATGAAATTGTCAACATATTAGGCTACAATGTGCCAGAAAATGCACAAGTATTAGTTAATGTATGGGCCATGGGAAGAGATTCAACTATTTGGGAAAATTCAAATATGTTCTTGCCGGAAAGATTTATAGAAAGTGATATTAATTACAAGGGTAATAATTTTGAGCTTATACCGTTTGGAGCAGGGAAAAGAATTTGTCCAGGATTGCCATTAGCTCATAGGACTGTGCATTTAATAGTGGCTTCCCTTGTACACAATTTTGAATGGAATTTAGCTGATATGGTAGTGCCTGAAGAGATGAATATGGATGAGAAATTTGGGTTAACTTTAAAGAGGGTCCAATCTCTTCGAGTTCAAGCTATTTCATCAGCTTGA 1506 0.3546 MENQTLLLLITFMSATILIFILRNKKSTKLPPGPYPLPIIGNILELGKNPHKSLTKLSKTYGPIMTLKLGTRITIVISSPQVAKQVLHENSHIFSNRTVPHALFAVDHHKFSVGWLPTLALWKKLRKVCATKVFSTQMLDSTKILRQQKLQELLDYVKEKSKKGEAFDIGEAVFTTVLNSISNTLFSMDLAHSTHDEKSQEFKNIIWGIMEEAGNPNVSDFFPILGPLDPQGFYSRMTNHMKKLCEIFDKIIEERVSSRSSRVDDSEDVCNDVLDSLLKNNIEETSSELSRKEMVHLFLDLFVAGIDTTSSIIEWIMAELLRNPEKLIKAKKELSQTIDKDEIIEESHISKLIFLQAIVKETFRLHPPIPLLLPHKCDEIVNILGYNVPENAQVLVNVWAMGRDSTIWENSNMFLPERFIESDINYKGNNFELIPFGAGKRICPGLPLAHRTVHLIVASLVHNFEWNLADMVVPEEMNMDEKFGLTLKRVQSLRVQAISSA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02559 501 FunFam Cytochrome P450 76C4 22 496 - -
Vivi6g02559 501 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 CDD CYP76-like 58 495 - -
Vivi6g02559 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 498 - -
Vivi6g02559 501 SUPERFAMILY Cytochrome P450 31 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 Gene3D Cytochrome P450 21 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Vivi6g02559 501 Pfam Cytochrome P450 31 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g02559 501 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02559 Vivi-Chr6 109017335 109019228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02559 1 493 Cytochrome P450 AT2G45550 47.400 1.60e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02559 - - cam:101504674 699.893