Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02541 ATGTCTATAAGCTTTAGACGGTGTTTTGTGCCTGGAAGAGTTCGGGTGGCTGTAAGATTGAGGCCTCGAAATGCTGAAGAAGAAATGGCAGATGCTGATTTTGGTGACTGTGTCGAATTACAGCCAGAGCTTAAAAGACTGAAACTTCGCAGAAACAATTGGGATTCAGACACTTATGAGTTTGATGAGGTGCTTACTCAATCCGCATCCCAGAAGCGTGTCTATGAGGTTGTGGCTAAGCCAGTCGTGGAGAGTGTTCTTGATGGTTATAATGGGACCGTGATGGCTTATGGTCAAACTGGAACGGGGAAAACTTTTACTCTTGGACAATTAGGGGAAGGAGACACATCTAGTCGTGGAATCATGGTGCGTTCCATGGAGGATATTCTTGCTGATTTATCTCTAGATACTGATGCTGTTACAGTCTCCTATCTGCAGCTTTACATGGAGACTCTTCAGGACTTGCTTAATCCAGCAAATGACAACATTCCGATAGTGGAAGATCCAAGAACTGGCGATGTATCTCTGCTTGGGGCAACTATTGTAGAAATCAGGGATCAGCAGAGCTTTTTGGAGTTGTTAAGAATCGGGGAAGCAAATCGGACTGCTGCTAATACCAAAATGAACACAGAATCTTCTCGTAGTCACGCTATGCTGACGGTACATATTAAGAGGTCTGTCGCAGAAAGCGAAGATATTGTATCTAGTCAAAATGGTGATGCCTCTCACTTGATTAAACCCTCAAAACCACTTGTTCGGAAGAGCAAGTTGGTAGTGGTAGACTTAGCAGGTTCAGAGCGTGTTCACAAATCAGGAAGTGAAGGGATCATGCTAGAGGAAGCTAAATCCATTAATCTTTCACTTAGTTCACTAGGAAAATGTATTAATGCCCTAGCAGAGAATAATACTCATGTTCCATTTCGTGATTCAAAGCTCACCAGGATGCTCCGAGATTCTTTTGGTGGCACAGCTAGGACTTCCTTGATAGTGACTATTGGTCCATCTCCACGCCATCGAGGAGAGACTTCCAGTACCATATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAGTTTGATTATAAAAGCCTGTCACGAAAGCTTGAAATACAGTTAGATAAGCTCATTGCAGAGAATGAGAGGCAGCATAAATCTTTCGAGGATGACATTGAAAAAATAAATTTGGAAGCGCAGTGTCGAATTGTTGAGGTTGAGAGAAGCTTTGCTAATGCGTTAGAGAAAGAGAAACTGAAATGCCAAATGGAGTATATGGGAATTGTAAAGGAGCTGGAACAGAAGTTGGTGTTGAATCAAGACAGACATGATTGCAATGCTGATAACGGAGAGGGTCCTGCACAATCTTCTGCAGATGAAGTTGCTGAGATCAAAATGCTGCTCGAAACTGAAAGCAATAGAAGAAAAGCAGCTGAAGAAGAGATAACACATCTAAAACGGAAGCTGGGGAATTATACACAACCGGAGGCCGGAGGGGGTTTGGAGATTGCAAAGCTTCACAACATCCTGGAGGAGGAAGCTCATCAGAAAAAGAAACTTGAAGAAGAGATAATAATATTAAGAAGTCAATTATTGCAAGCAAACTTTGAAACTGAGCAGATGAGAAGGTGTTTGGAAGGTGGAGGCTCTGGGAGTGCATTTTCTACCACAGATTCCTCCACGGCTCAAGTTAGGCATTCCCAATTCAAAGATGCTGCGAATGGTCAGAAGTCATCTGTTGCTACACTCTTTGAGCAAGTTGGATTGCAAAAGATATTGTCATTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTGGCCAACCTAGCAGCCGAAGAAGCTAATCAAAAAAGAATTGTTGAAGCTGGTGGTCTTACTTCCTTGCTGATGCTTCTTCGAAGATATGAGGATGAAACTGTTCGCAGAGTAGCTGCTGGGGCAATTGCCAATCTTGCTATGAATGAAGCGAATCAAGAACTTATAATGGCTGAAGGAGGAATCACTCTGTTATCAATGGCTGCATCCGATGCTGAAGATCCCCAAACTCTTCGAATGATTGCCGGGGCAATTGCTAACCTATGTGGAAATGATAAAATATTGATGACACTGAGATCTCAGGGCGGTATCAAGGCCTTACTGGGAATCGTAAGATGTGGACATCCAGATGTTCTTTCCCAAGTTGCACGAGGAATCGCCAATTTTGCGAAATGCGAGTCTCGAGCTTCTAATCAAGGGATAAAAACTGGCCGATCTATATTGATAGAAGATGGTGCTCTTCCGTGGATAGTACAAAATGCTAATAATGAAGCAGCACCAATTAGGCGTCACATTGAGCTTGCACTTTGCCACTTGGCACAGCATGAGGCAAATGCAAAGGACATGATTAGTGGTGGTGCTCTTTGGGAACTTGTCAGGATTTCAAGGGATTGTTCACGAGAGGATATACGGAGTCTTGCTCATAGGACTCTCAGTTCTATTACAACATTCAAATCTGAATTGCGACGATTGCGTGTAGATTATTGA 2550 0.4298 MSISFRRCFVPGRVRVAVRLRPRNAEEEMADADFGDCVELQPELKRLKLRRNNWDSDTYEFDEVLTQSASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGQLGEGDTSSRGIMVRSMEDILADLSLDTDAVTVSYLQLYMETLQDLLNPANDNIPIVEDPRTGDVSLLGATIVEIRDQQSFLELLRIGEANRTAANTKMNTESSRSHAMLTVHIKRSVAESEDIVSSQNGDASHLIKPSKPLVRKSKLVVVDLAGSERVHKSGSEGIMLEEAKSINLSLSSLGKCINALAENNTHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEIQLDKLIAENERQHKSFEDDIEKINLEAQCRIVEVERSFANALEKEKLKCQMEYMGIVKELEQKLVLNQDRHDCNADNGEGPAQSSADEVAEIKMLLETESNRRKAAEEEITHLKRKLGNYTQPEAGGGLEIAKLHNILEEEAHQKKKLEEEIIILRSQLLQANFETEQMRRCLEGGGSGSAFSTTDSSTAQVRHSQFKDAANGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMAASDAEDPQTLRMIAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKTGRSILIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEANAKDMISGGALWELVRISRDCSREDIRSLAHRTLSSITTFKSELRRLRVDY 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02541 849 FunFam Kinesin-like protein 6 385 - -
Vivi6g02541 849 PANTHER CENTROMERE PROTEIN E 13 575 IPR027640 GO:0003777|GO:0007018
Vivi6g02541 849 Pfam Armadillo/beta-catenin-like repeat 624 661 IPR000225 GO:0005515
Vivi6g02541 849 FunFam Kinesin-like protein 561 837 - -
Vivi6g02541 849 Gene3D - 569 681 IPR011989 -
Vivi6g02541 849 ProSiteProfiles Kinesin motor domain profile. 13 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g02541 849 CDD KISc 13 353 - -
Vivi6g02541 849 Gene3D - 682 848 IPR011989 -
Vivi6g02541 849 Coils Coil 465 492 - -
Vivi6g02541 849 Coils Coil 382 402 - -
Vivi6g02541 849 PRINTS Kinesin heavy chain signature 89 110 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g02541 849 PRINTS Kinesin heavy chain signature 305 326 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g02541 849 PRINTS Kinesin heavy chain signature 256 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g02541 849 SUPERFAMILY ARM repeat 580 843 IPR016024 -
Vivi6g02541 849 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 591 633 IPR000225 GO:0005515
Vivi6g02541 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 388 IPR027417 -
Vivi6g02541 849 Gene3D Kinesin motor domain 10 385 IPR036961 -
Vivi6g02541 849 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 632 675 IPR000225 GO:0005515
Vivi6g02541 849 Coils Coil 507 541 - -
Vivi6g02541 849 SMART arm_5 796 837 IPR000225 GO:0005515
Vivi6g02541 849 SMART arm_5 621 662 IPR000225 GO:0005515
Vivi6g02541 849 SMART arm_5 705 745 IPR000225 GO:0005515
Vivi6g02541 849 SMART arm_5 663 704 IPR000225 GO:0005515
Vivi6g02541 849 SMART arm_5 581 620 IPR000225 GO:0005515
Vivi6g02541 849 ProSitePatterns Kinesin motor domain signature. 255 266 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vivi6g02541 849 SMART kinesin_4 11 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g02541 849 Pfam Kinesin motor domain 19 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02541 Vivi-Chr6 108195693 108208874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02541 12 388 Calmodulin-binding Proteins AT5G65930 34.961 1.29e-47 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02541 - K10396 gmx:100789455 1469.14