Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02522 ATGGCAGAAGGAAAAGGAAGAGTTTGCGTAACAGGAGGAACAGGTTTTATTGGTTCATGGATTATCAAGAAACTCCTTGAAGATGGTTACAGCGTTAATACAACTGTTAGAGCTGATCCGGAGAAAAAGAGAGATCTTAGCTTTCTCACAAATCTTCCCGGTGCATCTGAAAAACTAAAATTTTTCAATGCCGATCTTGACGATCCAGAAAGTTTCAATGAAGCAATTGAAGGGTGTGTTGGAATATTTCACACCGCTGCTTCGGTTGATTTTGAAGAGAAAGAACCAGAAGAAGTAGTGACAAAAAGAAGCATTGCGGGAGCTTTAGGAATTCTAAAAGCATGCAAAAACTCTAAGACAGTGAAGAGGGTTGTTTACACTTCAAGTGCTTCTGCAGTTTATTGTCAAGACAAAGAAAAAGAAAAGGACGTAATGGACGAAAGTTATTGGAGTGATATAGACATTCTTAGAAATCATAAACCATTTGGTTGGGCTTATTCAGTTTCTAAGACACAAGCGGAGAAAGCTGTTCTTGAATATGGAGAACAAAATGGGTTGGATATTGTGACTATAATACCAACCATTGTTGTTGGACCCTTCATTTGTCCTAAGCTTCCTACCTCTGTTTATGGTGTACTACCTTACTTATTCGGTAATACTGACAACAGTCCAATATCTCGTTTTCATATGGTGCATGTTGATGATGTTGCACGAGCACATATATTCTTACTGGAACATCCTAATCCAAAAGGGAGATACAATTGTTCACCATTCCTTGCAACTGTTGAGGAAGTAGTTGACATCGTTTCTTCAAAACATCCTGAATTTCAAATTCCAAAGTCCAAATTGCTCGAGGGACCTAAAGGTCTGGAGCTTCCACATTTAACATCAAAGAAACTCATTGATGCTGGATTTGAGTTCAAGCATACTATTGAGGAAACGTTTGAGGATGCGATTCAAAGTTGCAAGGAAAAGGGGTTTTTTTGA 987 0.384 MAEGKGRVCVTGGTGFIGSWIIKKLLEDGYSVNTTVRADPEKKRDLSFLTNLPGASEKLKFFNADLDDPESFNEAIEGCVGIFHTAASVDFEEKEPEEVVTKRSIAGALGILKACKNSKTVKRVVYTSSASAVYCQDKEKEKDVMDESYWSDIDILRNHKPFGWAYSVSKTQAEKAVLEYGEQNGLDIVTIIPTIVVGPFICPKLPTSVYGVLPYLFGNTDNSPISRFHMVHVDDVARAHIFLLEHPNPKGRYNCSPFLATVEEVVDIVSSKHPEFQIPKSKLLEGPKGLELPHLTSKKLIDAGFEFKHTIEETFEDAIQSCKEKGFF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02522 328 CDD FR_SDR_e 8 305 - -
Vivi6g02522 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 319 - -
Vivi6g02522 328 Gene3D - 5 328 - -
Vivi6g02522 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 323 IPR036291 -
Vivi6g02522 328 Pfam NAD dependent epimerase/dehydratase family 8 254 IPR001509 -
Vivi6g02522 328 FunFam Dihydroflavonol reductase 5 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02522 Vivi-Chr6 107758238 107759718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02522 4 328 Monolignol Biosynthesis Gene Families AT2G02400 37.730 2.67e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02522 - K13265 gmx:102659875 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02522 6 107758238 107759718 Vivi6g02522 6 107758238 107759718 ECH